Rn01482626_m1 Best Coverage

• Gene Symbol: Pomk
• Gene Name: protein-O-mannose kinase
• Gene Aliases: RGD1310810, Sgk196
• Chromosome Location: Chr.16: 70859251 - 70869653 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pomk
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001024883.1	NP_001020054.1	4 - 5	562		73
	XM_008771353.1	XP_008769575.1	2 - 3	336		73
GenBank mRNA	BC097466.1	-	4 - 5	562		73
	FQ211927.1	-	4 - 5	551		73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600000804.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pomk

Gene Ontology Categories:

Process(es)

neuron migration
protein phosphorylation
protein O-linked glycosylation
brain development
learning or memory
sensory perception of pain
carbohydrate phosphorylation
neuromuscular process

Function(s)

protein kinase activity
ATP binding
phosphotransferase activity, alcohol group as acceptor
carbohydrate kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P713907	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	550274	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	439561	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	766812	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	785474	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	972585	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	636917	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	237138	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	144908	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	60285	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	75851	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P713907	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P713907	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P713907	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1060064	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	103522	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	45518	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10788780	-	-
Affymetrix Rat Gene 1.0 ST Array	10788778	-	-
Affymetrix Rat Gene 1.0 ST Array	10788781	-	-
Affymetrix Rat Gene 1.0 ST Array	10788779	-	-
Affymetrix Rat Gene 1.1 ST Array	10788777	-	-
Rat Genome 230 2.0 Array	1378868_PM_at	-	-
Rat Genome 230 2.0 Array	1382813_at	-	-
Rat Genome 230 2.0 Array	1378868_at	-	-
Rat Genome 230 2.0 Array	1377053_at	-	-
Rat Genome 230 2.0 Array	1377053_PM_at	-	-
Rat Genome 230 2.0 Array	1382813_PM_at	-	-
Affymetrix HT Rat Focus Array	1378868_PM_at	-	-
Affymetrix HT Rat Focus Array	1382813_at	-	-
Affymetrix HT Rat Focus Array	1378868_at	-	-
Affymetrix HT Rat Focus Array	1382813_PM_at	-	-
Affymetrix HT Rat Focus Array	1377053_at	-	-
Affymetrix HT Rat Focus Array	1377053_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1600006059.rn.1	TC1600000804.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600006060.rn.1	TC1600000804.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600006061.rn.1	TC1600000804.rn.1	RTA TC
Rat Expression Set 230	1377053_PM_at	-	-
Rat Expression Set 230	1377053_at	-	-
Rat Expression Set 230	1382813_at	-	-
Rat Expression Set 230	1382813_PM_at	-	-
Rat Expression Set 230	1378868_PM_at	-	-
Rat Expression Set 230	1378868_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10788777	-	-
Rat Genome U34 Set	rc_AI111391_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357203	-	-