Rn01483812_m1 Best Coverage

• Gene Symbol: Rnf2
• Gene Name: ring finger protein 2
• Gene Aliases: -
• Chromosome Location: Chr.13: 68829714 - 68859929 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rnf2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001025667.1	NP_001020838.1	5 - 6	935		72
	XM_006249990.2	XP_006250052.1	5 - 6	873		72
	XM_006249991.2	XP_006250053.1	5 - 6	955		72
GenBank mRNA	AB568264.1	-	4 - 5	739		72
	BC098941.1	-	5 - 6	935	7456372	72

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300001620.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rnf2

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
mitotic cell cycle
gastrulation with mouth forming second
transcription, DNA-templated
anterior/posterior axis specification
histone ubiquitination
spinal cord development
response to retinoic acid
histone H2A monoubiquitination
histone H2A-K119 monoubiquitination

Function(s)

molecular_function
chromatin binding
ubiquitin-protein transferase activity
zinc ion binding
ligase activity
ubiquitin protein ligase activity
RING-like zinc finger domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P16919	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P988240	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	968210	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	118509	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	847836	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	317144	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	632131	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	115688	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	235244	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	154538	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	445361	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	597912	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	799868	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	716761	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	14721	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	668723	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	271031	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	353617	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	919720	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	335310	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	770476	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	53742	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	100560	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	83658	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P16919	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P988240	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P988240	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P16919	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P16919	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P988240	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P988240	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P16919	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	44114	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	68601	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10768566	-	-
Affymetrix Rat Gene 1.0 ST Array	10768568	-	-
Affymetrix Rat Gene 1.0 ST Array	10768563	-	-
Affymetrix Rat Gene 1.0 ST Array	10768567	-	-
Affymetrix Rat Gene 1.0 ST Array	10768562	-	-
Affymetrix Rat Gene 1.0 ST Array	10768561	-	-
Affymetrix Rat Gene 1.0 ST Array	10768565	-	-
Affymetrix Rat Gene 1.0 ST Array	10768564	-	-
Affymetrix Rat Gene 1.1 ST Array	10768560	-	-
Rat Genome 230 2.0 Array	1383269_at	-	-
Rat Genome 230 2.0 Array	1376805_PM_at	-	-
Rat Genome 230 2.0 Array	1376805_at	-	-
Rat Genome 230 2.0 Array	1383269_PM_at	-	-
Affymetrix HT Rat Focus Array	1383269_PM_at	-	-
Affymetrix HT Rat Focus Array	1383269_at	-	-
Affymetrix Rat Clariom S Assay	PSR1300011081.rn.1	TC1300001620.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300011078.rn.1	TC1300001620.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300011079.rn.1	TC1300001620.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300011080.rn.1	TC1300001620.rn.1	RTA TC
Rat Expression Set 230	1383269_PM_at	-	-
Rat Expression Set 230	1383269_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10768560	-	-
Rat Genome U34 Set	rc_AA956534_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22283706	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1371460	-	-