Rn01483937_m1

• Gene Symbol: Pogk
• Gene Name: pogo transposable element with KRAB domain
• Gene Aliases: -
• Chromosome Location: Chr.13: 84603126 - 84619083 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pogk
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107194.2	NP_001100664.2	4 - 5	457		154
	XM_006250161.2	XP_006250223.1	5 - 6	831		154
	XM_006250162.2	XP_006250224.1	5 - 6	696		154

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300001847.rn.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

viral or transposable element protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated

Function(s)

DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P088910	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P088905	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	304747	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	727246	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	619204	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	783720	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	507690	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	690100	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	922958	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	665852	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	834366	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	334101	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	431335	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	512923	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	24898	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	660500	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	175561	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	50087	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	78179	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P088910	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P088905	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P088910	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P088905	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P088905	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P088910	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13566	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10769598	-	-
Affymetrix Rat Gene 1.0 ST Array	10769600	-	-
Affymetrix Rat Gene 1.0 ST Array	10769599	-	-
Affymetrix Rat Gene 1.0 ST Array	10769597	-	-
Affymetrix Rat Gene 1.0 ST Array	10769596	-	-
Affymetrix Rat Gene 1.1 ST Array	10769595	-	-
Rat Genome 230 2.0 Array	1379731_at	-	-
Rat Genome 230 2.0 Array	1385313_PM_at	-	-
Rat Genome 230 2.0 Array	1379731_PM_at	-	-
Rat Genome 230 2.0 Array	1385313_at	-	-
Affymetrix Rat Clariom S Assay	PSR1300013062.rn.1	TC1300001847.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300013061.rn.1	TC1300001847.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300013057.rn.1	TC1300001847.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300013058.rn.1	TC1300001847.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300013059.rn.1	TC1300001847.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300013060.rn.1	TC1300001847.rn.1	RTA TC
Rat Expression Set 230	1379731_at	-	-
Rat Expression Set 230	1385313_PM_at	-	-
Rat Expression Set 230	1379731_PM_at	-	-
Rat Expression Set 230	1385313_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10769595	-	-
Rat Genome U34 Set	rc_AA851877_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20874430	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1356636	-	-