Rn01484520_m1

• Gene Symbol: Chst1
• Gene Name: carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
• Gene Aliases: -
• Chromosome Location: Chr.3: 81496772 - 81512829 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chst1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001011955.1	NP_001011955.1	2 - 3	258		68
	XM_006234549.2	XP_006234611.1	1 - 2	1099		68
	XM_008762023.1	XP_008760245.1	2 - 3	207		68
GenBank mRNA	BC086551.1	-	2 - 3	258	7302418	68
	FQ211655.1	-	2 - 3	587		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300001179.rn.1

Additional Information:

This assay is in the 5'UTR region of the BC086551.1,NM_001011955.1,XM_006234549.2,XM_008762023.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chst1

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

galactose metabolic process
sulfur compound metabolic process
inflammatory response
keratan sulfate metabolic process

Function(s)

sulfotransferase activity
keratan sulfotransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P062618	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	92462	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	815400	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	481155	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	81044	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	943831	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	677010	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	812423	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	538124	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	775220	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	453967	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	354933	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	89130	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P062618	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P062618	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P062618	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P19634	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	32777	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	76538	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10838042	-	-
Affymetrix Rat Gene 1.0 ST Array	10838041	-	-
Affymetrix Rat Gene 1.0 ST Array	10838040	-	-
Affymetrix Rat Gene 1.1 ST Array	10838039	-	-
Rat Genome 230 2.0 Array	1384192_PM_at	-	-
Rat Genome 230 2.0 Array	1384192_at	-	-
Affymetrix HT Rat Focus Array	1384192_PM_at	-	-
Affymetrix HT Rat Focus Array	1384192_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300008387.rn.1	TC0300001179.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300008388.rn.1	TC0300001179.rn.1	RTA TC
Rat Expression Set 230	1384192_at	-	-
Rat Expression Set 230	1384192_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10838039	-	-
Rat Genome U34 Set	rc_AA819913_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22200862	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376641	-	-