Rn01485252_m1

• Gene Symbol: Mavs
• Gene Name: mitochondrial antiviral signaling protein
• Gene Aliases: Visa
• Chromosome Location: Chr.3: 123776154 - 123790572 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Mavs
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001005556.1	NP_001005556.1	3 - 4	587		79
	XM_006235034.2	XP_006235096.1	3 - 4	455		79
	XM_006235035.2	XP_006235097.1	3 - 4	1169		79
	XM_006235036.2	XP_006235098.1	4 - 5	488		79
	XM_006235037.2	XP_006235099.1	2 - 3	491		79
	XM_008762179.1	XP_008760401.1	3 - 4	1662		79
	XM_008762180.1	XP_008760402.1	3 - 4	475		79
GenBank mRNA	BC081869.1	-	3 - 4	587		79

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300001741.rn.1

Additional Information:

This assay is in the 5'UTR region of the XM_006235037.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Mavs

Gene Ontology Categories:

Process(es)

positive regulation of protein phosphorylation
activation of innate immune response
positive regulation of defense response to virus by host
signal transduction
positive regulation of type I interferon production
positive regulation of interferon-alpha production
positive regulation of interferon-beta production
positive regulation of interleukin-8 production
positive regulation of tumor necrosis factor production
RIG-I signaling pathway
defense response to bacterium
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of viral genome replication
innate immune response
positive regulation of transcription by RNA polymerase II
positive regulation of DNA-binding transcription factor activity
defense response to virus
positive regulation of type I interferon-mediated signaling pathway
cellular response to exogenous dsRNA
positive regulation of chemokine (C-C motif) ligand 5 production
positive regulation of IP-10 production
regulation of peroxisome organization

Function(s)

protein kinase binding
CARD domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0300012624.rn.1	TC0300001741.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300012625.rn.1	TC0300001741.rn.1	RTA TC