Rn01485701_m1 Best Coverage

• Gene Symbol: Cry2
• Gene Name: cryptochrome circadian clock 2
• Gene Aliases: -
• Chromosome Location: Chr.3: 81314151 - 81344109 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cry2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133405.2	NP_596896.2	4 - 5	650		57
GenBank mRNA	AY033877.1	-	4 - 5	660		57
	BC166416.1	-	4 - 5	650	9033484	57
	FQ211347.1	-	4 - 5	660		57

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300003680.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cry2

Panther Classification:

Molecular Function -

DNA photolyase

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
photoreactive repair
DNA repair
transcription, DNA-templated
protein import into nucleus
signal transduction
circadian rhythm
protein-chromophore linkage
lipid storage
negative regulation of phosphoprotein phosphatase activity
response to insulin
circadian regulation of gene expression
glucose homeostasis
regulation of circadian rhythm
negative regulation of circadian rhythm
entrainment of circadian clock by photoperiod
negative regulation of transcription, DNA-templated
regulation of sodium-dependent phosphate transport
negative regulation of glucocorticoid receptor signaling pathway
negative regulation of glucocorticoid secretion

Function(s)

transcription regulatory region sequence-specific DNA binding
transcription factor activity, transcription factor binding
DNA binding
damaged DNA binding
single-stranded DNA binding
deoxyribodipyrimidine photo-lyase activity
DNA photolyase activity
DNA (6-4) photolyase activity
photoreceptor activity
kinase binding
protein kinase binding
phosphatase binding
nuclear hormone receptor binding
ubiquitin binding
FAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0300028054.rn.1	TC0300003680.rn.1	RTA TC