Rn01487287_m1 Best Coverage

• Gene Symbol: Atp5c1
• Gene Name: ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
• Gene Aliases: -
• Chromosome Location: Chr.17: 72209320 - 72231566 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atp5c1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053825.2	NP_446277.1	3 - 4	258		64
	XM_006254229.2	XP_006254291.1	3 - 4	312		64
	XM_006254230.2	XP_006254292.1	3 - 4	313		64
	XM_006254231.2	XP_006254293.1	3 - 4	224		64
GenBank mRNA	BC059158.1	-	3 - 4	262	6920493	64
	FQ212577.1	-	3 - 4	246		64
	FQ212651.1	-	3 - 4	256		64
	FQ212813.1	-	3 - 4	256		64
	FQ213008.1	-	3 - 4	256		64
	FQ213785.1	-	3 - 4	258		64
	FQ213852.1	-	3 - 4	258		64
	FQ213883.1	-	3 - 4	252		64
	FQ214745.1	-	3 - 4	236		64
	FQ214863.1	-	3 - 4	312		64
	FQ215205.1	-	3 - 4	256		64
	FQ215286.1	-	3 - 4	231		64
	FQ215426.1	-	3 - 4	255		64
	FQ215847.1	-	3 - 4	256		64
	FQ216198.1	-	3 - 4	252		64
	FQ216285.1	-	3 - 4	246		64
	FQ216490.1	-	3 - 4	256		64
	FQ216539.1	-	3 - 4	240		64
	FQ216647.1	-	3 - 4	258		64
	FQ216736.1	-	3 - 4	256		64
	FQ218995.1	-	3 - 4	258		64
	FQ219484.1	-	3 - 4	256		64
	FQ219563.1	-	3 - 4	256		64
	FQ220076.1	-	3 - 4	256		64
	FQ220217.1	-	3 - 4	258		64
	FQ220355.1	-	3 - 4	256		64
	FQ224939.1	-	3 - 4	256		64
	FQ229987.1	-	3 - 4	279		64
	FQ234981.1	-	3 - 4	256		64
	L19927.1	-	1 - 2	136		64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1700000945.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Transporter, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atp5c1

Panther Classification:

Molecular Function -

ATP synthase

Gene Ontology Categories:

Process(es)

oxidative phosphorylation
ATP synthesis coupled proton transport
ATP metabolic process

Function(s)

ATPase activity
poly(A) RNA binding
proton-transporting ATP synthase activity, rotational mechanism
proton-transporting ATPase activity, rotational mechanism

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1700006531.rn.1	TC1700000945.rn.1	RTA TC