Rn01487700_g1

• Gene Symbol: Hacd1
• Gene Name: 3-hydroxyacyl-CoA dehydratase 1
• Gene Aliases: Ptpla
• Chromosome Location: Chr.17: 81173238 - 81196012 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hacd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001101001.1	NP_001094471.1	3 - 4	357		159
	XM_006254292.2	XP_006254354.1	2 - 3	1030		159
	XM_006254293.2	XP_006254355.1	2 - 3	1031		159
GenBank mRNA	AM260199.1	-	3 - 4	357		159

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1700002258.rn.1

Additional Information:

This assay is in the 5'UTR region of the XM_006254292.2,XM_006254293.2 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Protein Phosphatase, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

regulation of G2/M transition of mitotic cell cycle
positive regulation of cell-substrate adhesion
myotube differentiation
sphingolipid biosynthetic process
fatty acid elongation
cellular macromolecular complex assembly
very long-chain fatty acid biosynthetic process
cementum mineralization
regulation of G1/S transition of mitotic cell cycle

Function(s)

3-hydroxyacyl-CoA dehydratase activity
enzyme binding
hydroxyapatite binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1700015257.rn.1	TC1700002258.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700015250.rn.1	TC1700002258.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700015245.rn.1	TC1700002258.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1700015249.rn.1	TC1700002258.rn.1	RTA TC