Rn01488742_m1 Best Coverage

• Gene Symbol: Psmb5
• Gene Name: proteasome (prosome, macropain) subunit, beta type 5
• Gene Aliases: -
• Chromosome Location: Chr.15: 33259039 - 33263634 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Psmb5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001105727.2	NP_001099197.2	2 - 3	522		65
GenBank mRNA	AI602737.1	-	1 - 2			65
	D45247.1	-	2 - 3	520		65
	FQ214283.1	-	1 - 2	56		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1500001674.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

response to oxidative stress
proteasome-mediated ubiquitin-dependent protein catabolic process
proteolysis involved in cellular protein catabolic process

Function(s)

threonine-type endopeptidase activity
peptidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P731541	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	533719	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	119340	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	463385	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	22954	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P731541	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P731541	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P731541	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P731541	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10783602	-	-
Affymetrix Rat Gene 1.0 ST Array	10783603	-	-
Affymetrix Rat Gene 1.0 ST Array	10783601	-	-
Affymetrix Rat Gene 1.0 ST Array	10783600	-	-
Affymetrix Rat Gene 1.1 ST Array	10783599	-	-
Rat Genome 230 2.0 Array	1385532_x_at	-	-
Rat Genome 230 2.0 Array	1385531_at	-	-
Rat Genome 230 2.0 Array	1371348_at	-	-
Rat Genome 230 2.0 Array	1385531_PM_at	-	-
Rat Genome 230 2.0 Array	1385532_PM_x_at	-	-
Rat Genome 230 2.0 Array	1371348_PM_at	-	-
Affymetrix HT Rat Focus Array	1385531_at	-	-
Affymetrix HT Rat Focus Array	1385532_x_at	-	-
Affymetrix HT Rat Focus Array	1385532_PM_x_at	-	-
Affymetrix HT Rat Focus Array	1371348_PM_at	-	-
Affymetrix HT Rat Focus Array	1371348_at	-	-
Affymetrix HT Rat Focus Array	1385531_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1500010608.rn.1	TC1500001674.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500010609.rn.1	TC1500001674.rn.1	RTA TC
Rat Expression Set 230	1371348_at	-	-
Rat Expression Set 230	1371348_PM_at	-	-
Rat Expression Set 230	1385531_PM_at	-	-
Rat Expression Set 230	1385532_x_at	-	-
Rat Expression Set 230	1385532_PM_x_at	-	-
Rat Expression Set 230	1385531_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10783599	-	-
Rat Genome U34 Set	D45247_at	-	-
Rat Genome U34 Set	rc_AA891226_s_at	-	-
Rat Genome U34 Set	D45247_g_at	-	-
Rat Genome U34 Set	rc_AI011563_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21758258	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1367028	-	-