Rn01489297_m1 Best Coverage

• Gene Symbol: Atg10
• Gene Name: autophagy related 10
• Gene Aliases: -
• Chromosome Location: Chr.2: 19853546 - 20152900 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atg10
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001109505.1	NP_001102975.1	3 - 4	259		63
	XM_006231756.2	XP_006231818.1	4 - 5	526		63
	XM_006231757.2	XP_006231819.1	3 - 4	1297		63
	XM_006231758.2	XP_006231820.1	3 - 4	275		63
	XM_006231759.2	XP_006231821.1	3 - 4	295		63

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200002583.rn.1

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

ubiquitin-protein ligase, protein modifying enzyme

Gene Ontology Categories:

Process(es)

protein lipidation
autophagy
biological_process
positive regulation of protein modification process
protein modification by small protein conjugation
autophagy in response to ER overload

Function(s)

molecular_function
Atg12 transferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0200017981.rn.1	TC0200002583.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200017984.rn.1	TC0200002583.rn.1	RTA TC