Rn01489772_m1

• Gene Symbol: Homer1
• Gene Name: homer homolog 1 (Drosophila)
• Gene Aliases: HOMER1F, Vesl-1
• Chromosome Location: Chr.2: 22909554 - 23012303 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Homer1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031707.1	NP_113895.1	1 - 2	296		110
	XM_006231775.2	XP_006231837.1	1 - 2	877		108
GenBank mRNA	AB003726.1	-	1 - 2	672		110
	AB007688.1	-	1 - 2	303		110
	AB017140.1	-	1 - 2	296		110
	AF030088.2	-	1 - 2	1207		110
	AF093267.1	-	1 - 2	741		110
	AF093268.1	-	1 - 2	733		110
	U92079.1	-	1 - 2	568		110

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200000158.rn.1

Additional Information:

This assay is in the 5'UTR region of the AB003726.1,AB007688.1,AB017140.1,AF093267.1,AF093268.1,NM_031707.1,U92079.1,XM_006231775.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Homer1

Gene Ontology Categories:

Process(es)

skeletal muscle contraction
G-protein coupled glutamate receptor signaling pathway
circadian rhythm
response to nicotine
protein localization to synapse
response to cocaine
behavioral response to cocaine
skeletal muscle fiber development
chemical homeostasis within a tissue
response to calcium ion
positive regulation of calcium ion transport
regulation of calcium ion import
regulation of store-operated calcium entry
regulation of cation channel activity

Function(s)

receptor binding
protein binding
type 5 metabotropic glutamate receptor binding
protein complex scaffold
G-protein coupled glutamate receptor binding
identical protein binding
ion channel binding
protein heterodimerization activity
scaffold protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0200000808.rn.1	TC0200000158.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200000810.rn.1	TC0200000158.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200000809.rn.1	TC0200000158.rn.1	RTA TC