Rn01490609_g1

• Gene Symbol: Chi3l1
• Gene Name: chitinase 3-like 1 (cartilage glycoprotein-39)
• Gene Aliases: Chil1
• Chromosome Location: Chr.13: 51022826 - 51030797 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chi3l1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053560.1	NP_446012.1	7 - 8	766		65
	XM_006249892.2	XP_006249954.2	7 - 8	820		65
	XM_008769574.1	XP_008767796.1	7 - 8	787		65
GenBank mRNA	AF062038.1	-	5 - 6	647		65
	BC091365.1	-	7 - 8	766	7319171	65
	EF467168.1	-	5 - 6			65
	FQ232458.1	-	4 - 5	432		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300000303.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chi3l1

Panther Classification:

Molecular Function -

glycosidase

Gene Ontology Categories:

Process(es)

carbohydrate metabolic process
chitin catabolic process
apoptotic process
inflammatory response
immune response
activation of NF-kappaB-inducing kinase activity
response to mechanical stimulus
positive regulation of peptidyl-threonine phosphorylation
lung development
response to tumor necrosis factor
positive regulation of angiogenesis
positive regulation of protein kinase B signaling
positive regulation of ERK1 and ERK2 cascade
response to interleukin-1
response to interleukin-6
cellular response to interleukin-1
cellular response to tumor necrosis factor
interleukin-8 secretion

Function(s)

molecular_function
chitinase activity
chitin binding
carbohydrate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1300001924.rn.1	TC1300000303.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300001923.rn.1	TC1300000303.rn.1	RTA TC