Rn01490633_m1

• Gene Symbol: Prrx1
• Gene Name: paired related homeobox 1
• Gene Aliases: Pmx1, Prx-1
• Chromosome Location: Chr.13: 81147038 - 81215560 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prrx1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_153821.1	NP_722543.1	1 - 2	564		102
	XM_006250151.2	XP_006250213.1	1 - 2	1302		102
GenBank mRNA	AY730764.1	-	1 - 2	288		102
	S82911.1	-	1 - 2	564		102

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300001786.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prrx1

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
positive regulation of mesenchymal cell proliferation
embryonic limb morphogenesis
inner ear morphogenesis
middle ear morphogenesis
positive regulation of smoothened signaling pathway
positive regulation of transcription by RNA polymerase II
neuron fate determination
embryonic cranial skeleton morphogenesis
embryonic skeletal system morphogenesis
artery morphogenesis
cartilage development
roof of mouth development
regulation of neuron projection regeneration
neuronal stem cell population maintenance

Function(s)

DNA binding
transcription coactivator activity
sequence-specific DNA binding
HMG box domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1300012684.rn.1	TC1300001786.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300012683.rn.1	TC1300001786.rn.1	RTA TC