Rn01492273_m1

• Gene Symbol: Pparg
• Gene Name: peroxisome proliferator-activated receptor gamma
• Gene Aliases: -
• Chromosome Location: Chr.4: 147274057 - 147399383 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pparg
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001145366.1	NP_001138838.1	1 - 2	120		132
GenBank mRNA	AF156665.1	-	1 - 2	120		132
	AF246457.1	-	1 - 2	48		132

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400001603.rn.1

Additional Information:

This assay is in the 5'UTR region of the AF156665.1,AF246457.1,NM_001145366.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Nuclear Receptor, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor, DNA-binding transcription factor, zinc finger transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
negative regulation of cytokine production
placenta development
negative regulation of acute inflammatory response
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
fatty acid metabolic process
activation of cysteine-type endopeptidase activity involved in apoptotic process
signal transduction
heart development
regulation of blood pressure
negative regulation of cell proliferation
response to cold
response to light stimulus
response to mechanical stimulus
response to organic substance
negative regulation of macrophage derived foam cell differentiation
negative regulation of receptor biosynthetic process
negative regulation of cholesterol storage
negative regulation of sequestering of triglyceride
response to organic cyclic compound
long-chain fatty acid transport
regulation of lipid metabolic process
fatty acid oxidation
monocyte differentiation
negative regulation of cell growth
epithelial cell differentiation
response to caffeine
organ regeneration
response to food
response to retinoic acid
cellular response to insulin stimulus
negative regulation of collagen biosynthetic process
response to vitamin A
response to lipid
peroxisome proliferator activated receptor signaling pathway
response to immobilization stress
response to diuretic
response to drug
glucose homeostasis
response to starvation
regulation of circadian rhythm
lipoprotein transport
positive regulation of apoptotic process
steroid hormone mediated signaling pathway
response to estrogen
cell fate commitment
fat cell differentiation
regulation of fat cell differentiation
positive regulation of fat cell differentiation
low-density lipoprotein particle receptor biosynthetic process
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of fatty acid oxidation
cell maturation
rhythmic process
negative regulation of smooth muscle cell proliferation
positive regulation of oligodendrocyte differentiation
white fat cell differentiation
brown fat cell differentiation
positive regulation of sequence-specific DNA binding transcription factor activity
negative regulation of telomerase activity
response to low-density lipoprotein particle
positive regulation of phagocytosis, engulfment
negative regulation of interferon-gamma-mediated signaling pathway
regulation of transcription involved in cell fate commitment
cellular response to lithium ion
cellular response to retinoic acid
cellular response to vitamin E
cellular response to prostaglandin stimulus
cellular response to prostaglandin E stimulus
cellular response to organic cyclic compound
cellular response to hyperoxia
negative regulation of peptide hormone secretion
negative regulation of cellular response to insulin stimulus
response to metformin
negative regulation of pancreatic stellate cell proliferation

Function(s)

RNA polymerase II regulatory region DNA binding
core promoter sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
protein binding
transcription factor binding
drug binding
zinc ion binding
enzyme binding
protein phosphatase binding
estrogen receptor binding
ligand-dependent nuclear receptor transcription coactivator activity
activating transcription factor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
retinoid X receptor binding
arachidonic acid binding
alpha-actinin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0400011422.rn.1	TC0400001603.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400011421.rn.1	TC0400001603.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400011420.rn.1	TC0400001603.rn.1	RTA TC