Rn01492307_g1

• Gene Symbol: aicda
• Gene Name: activation-induced cytidine deaminase
• Gene Aliases: aid
• Chromosome Location: Chr.4: 155359909 - 155371104 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: aicda
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100779.1	NP_001094249.1	4 - 5	633		72
GenBank mRNA	AJ606071.2	-	3 - 4	454		72

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400001727.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process
cytidine deamination
somatic diversification of immunoglobulins
somatic hypermutation of immunoglobulin genes
isotype switching
cellular response to lipopolysaccharide
DNA demethylation
negative regulation of DNA methylation-dependent heterochromatin assembly

Function(s)

molecular_function
cytidine deaminase activity
zinc ion binding
ubiquitin protein ligase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P113483	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P113478	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	824024	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	851601	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	277201	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	207846	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	886157	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	605811	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	136164	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	89946	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	57600	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	46824	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P113483	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P113478	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P113478	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P113483	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P113483	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P113478	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P252723	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10858513	-	-
Affymetrix Rat Gene 1.0 ST Array	10858515	-	-
Affymetrix Rat Gene 1.0 ST Array	10858516	-	-
Affymetrix Rat Gene 1.0 ST Array	10858514	-	-
Affymetrix Rat Gene 1.1 ST Array	10858511	-	-
Affymetrix Rat Clariom S Assay	PSR0400012540.rn.1	TC0400001727.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400012539.rn.1	TC0400001727.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400012542.rn.1	TC0400001727.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10858511	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21658061	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352905	-	-