Rn01492348_m1 Best Coverage

• Gene Symbol: Tnfrsf1a
• Gene Name: tumor necrosis factor receptor superfamily, member 1a
• Gene Aliases: TNFR-1, Tnfr1
• Chromosome Location: Chr.4: 157864916 - 157877634 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tnfrsf1a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013091.1	NP_037223.1	5 - 6	791		86
	XM_006237334.2	XP_006237396.1	4 - 5	1026		86
GenBank mRNA	AF329976.1	-	5 - 6	790		86
	AF329977.1	-	5 - 6	790		86
	AF329978.1	-	5 - 6	790		86
	AF329979.1	-	5 - 6	790		86
	AF329980.1	-	5 - 6	790		86
	AF329981.1	-	5 - 6	790		86
	BC086413.1	-	5 - 6	811	7110094	86
	M63122.1	-	5 - 6	791		86

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400001798.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Apoptosis, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Rat Inflammation, Inventoried, Rat_Inflammation, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tnfrsf1a

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Process(es)

response to hypoxia
prostaglandin metabolic process
defense response
inflammatory response
cell surface receptor signaling pathway
intrinsic apoptotic signaling pathway in response to DNA damage
response to wounding
positive regulation of gene expression
negative regulation of gene expression
programmed cell death
cytokine-mediated signaling pathway
response to lipopolysaccharide
negative regulation of interleukin-6 production
positive regulation of tumor necrosis factor production
tetrapyrrole metabolic process
positive regulation of protein import into nucleus, translocation
tumor necrosis factor-mediated signaling pathway
positive regulation of tyrosine phosphorylation of Stat1 protein
defense response to bacterium
regulation of apoptotic process
negative regulation of apoptotic process
positive regulation of I-kappaB kinase/NF-kappaB signaling
response to amino acid
response to alkaloid
positive regulation of neuron apoptotic process
response to ethanol
positive regulation of angiogenesis
positive regulation of transcription from RNA polymerase II promoter
negative regulation of inflammatory response
positive regulation of inflammatory response
protein heterooligomerization
cellular response to mechanical stimulus
cellular response to estradiol stimulus

Function(s)

protease binding
tumor necrosis factor-activated receptor activity
protein binding
protein complex binding
tumor necrosis factor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0400013166.rn.1	TC0400001798.rn.1	RTA TC