Rn01494271_m1

• Gene Symbol: Ercc8
• Gene Name: excision repair cross-complementation group 8
• Gene Aliases: Ckn1
• Chromosome Location: Chr.2: 39434617 - 39473392 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ercc8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107650.2	NP_001101120.2	9 - 10	900		74
	XM_008760726.1	XP_008758948.1	9 - 10	962		74
	XM_008760728.1	XP_008758950.1	8 - 9	810		74

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200000343.rn.1

• Set Membership: Amplicon length between 71 and 85, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

DNA metabolism protein, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

protein polyubiquitination
transcription-coupled nucleotide-excision repair
nucleotide-excision repair
cellular response to DNA damage stimulus
response to oxidative stress
biological_process
response to UV
response to X-ray
proteasome-mediated ubiquitin-dependent protein catabolic process
positive regulation of DNA repair
protein autoubiquitination

Function(s)

molecular_function
DNA helicase activity
ubiquitin-protein transferase activity
DNA-dependent ATPase activity
protein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P535959	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	236325	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	155100	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	287383	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	88656	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	146895	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	385606	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	307096	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	900440	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	533805	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	181724	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	166097	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	363230	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	864390	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	953525	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	860264	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	412460	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	726158	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	955571	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	615664	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	648379	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	746163	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	673819	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	428824	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	257450	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	962281	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	869433	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	793564	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	651990	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	943886	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	337791	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	18317	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	159809	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	137620	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P535959	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P535959	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P535959	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P535959	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P18920	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P535953	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	23416	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	29459	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10812916	-	-
Affymetrix Rat Gene 1.0 ST Array	10812911	-	-
Affymetrix Rat Gene 1.0 ST Array	10812915	-	-
Affymetrix Rat Gene 1.0 ST Array	10812908	-	-
Affymetrix Rat Gene 1.0 ST Array	10812914	-	-
Affymetrix Rat Gene 1.0 ST Array	10812907	-	-
Affymetrix Rat Gene 1.0 ST Array	10812912	-	-
Affymetrix Rat Gene 1.0 ST Array	10812917	-	-
Affymetrix Rat Gene 1.0 ST Array	10812918	-	-
Affymetrix Rat Gene 1.0 ST Array	10812919	-	-
Affymetrix Rat Gene 1.0 ST Array	10812910	-	-
Affymetrix Rat Gene 1.0 ST Array	10812909	-	-
Affymetrix Rat Gene 1.1 ST Array	10812906	-	-
Rat Genome 230 2.0 Array	1379299_at	-	-
Rat Genome 230 2.0 Array	1379299_PM_at	-	-
Affymetrix HT Rat Focus Array	1379299_at	-	-
Affymetrix HT Rat Focus Array	1379299_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200001969.rn.1	TC0200000343.rn.1	RTA TC
Rat Expression Set 230	1379299_PM_at	-	-
Rat Expression Set 230	1379299_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10812906	-	-
Rat Genome U34 Set	rc_AA800156_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21709728	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366313	-	-