Rn01495291_g1 Best Coverage

• Gene Symbol: Coch
• Gene Name: cochlin
• Gene Aliases: -
• Chromosome Location: Chr.6: 72359762 - 72363872 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Coch
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108710.1	NP_001102180.1	5 - 6	446		77
GenBank mRNA	BC160874.1	-		417		77

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600000744.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

sensory perception of sound
biological_process
regulation of cell shape
defense response to bacterium
positive regulation of innate immune response

Function(s)

molecular_function
collagen binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P781948	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P291037	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	637446	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	807492	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	555869	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	22210	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P781948	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P291037	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P781948	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P291037	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P291037	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P781948	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P291037	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P781948	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	44762	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10884542	-	-
Affymetrix Rat Gene 1.0 ST Array	10884552	-	-
Affymetrix Rat Gene 1.0 ST Array	10884548	-	-
Affymetrix Rat Gene 1.0 ST Array	10884550	-	-
Affymetrix Rat Gene 1.0 ST Array	10884547	-	-
Affymetrix Rat Gene 1.0 ST Array	10884546	-	-
Affymetrix Rat Gene 1.0 ST Array	10884544	-	-
Affymetrix Rat Gene 1.0 ST Array	10884549	-	-
Affymetrix Rat Gene 1.0 ST Array	10884543	-	-
Affymetrix Rat Gene 1.0 ST Array	10884551	-	-
Affymetrix Rat Gene 1.0 ST Array	10884545	-	-
Affymetrix Rat Gene 1.1 ST Array	10884531	-	-
Rat Genome 230 2.0 Array	1382083_at	-	-
Rat Genome 230 2.0 Array	1382083_PM_at	-	-
Affymetrix HT Rat Focus Array	1382083_at	-	-
Affymetrix HT Rat Focus Array	1382083_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600005038.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005029.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005035.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005037.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005036.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005039.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005030.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005032.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005031.rn.1	TC0600000744.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600005034.rn.1	TC0600000744.rn.1	RTA TC
Rat Expression Set 230	1382083_PM_at	-	-
Rat Expression Set 230	1382083_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10884531	-	-
Rat Genome U34 Set	rc_AA925486_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22155875	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1351350	-	-