Rn01496393_m1 Best Coverage

• Gene Symbol: Cxcl16
• Gene Name: chemokine (C-X-C motif) ligand 16
• Gene Aliases: -
• Chromosome Location: Chr.10: 57060005 - 57064600 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cxcl16
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001017478.1	NP_001017478.1	3 - 4	581		65
GenBank mRNA	BC079312.1	-	3 - 4	581		65
	DQ025528.1	-	3 - 4	857		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003129.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cxcl16

Gene Ontology Categories:

Process(es)

receptor-mediated endocytosis
T cell chemotaxis
positive regulation of cell growth
positive regulation of cell migration
response to cytokine
response to interferon-gamma
response to tumor necrosis factor
cellular response to lipopolysaccharide

Function(s)

low-density lipoprotein particle receptor activity
scavenger receptor activity
chemokine activity
chemokine receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P136909	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	176504	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	462857	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	133115	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	6646	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P136909	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P136909	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P136909	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	24003	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10744465	-	-
Affymetrix Rat Gene 1.0 ST Array	10744466	-	-
Affymetrix Rat Gene 1.0 ST Array	10744461	-	-
Affymetrix Rat Gene 1.0 ST Array	10744463	-	-
Affymetrix Rat Gene 1.0 ST Array	10744464	-	-
Affymetrix Rat Gene 1.0 ST Array	10744462	-	-
Affymetrix Rat Gene 1.1 ST Array	10744460	-	-
Rat Genome 230 2.0 Array	1372064_PM_at	-	-
Rat Genome 230 2.0 Array	1372064_at	-	-
Affymetrix HT Rat Focus Array	1372064_PM_at	-	-
Affymetrix HT Rat Focus Array	1372064_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000028109.rn.1	TC1000003129.rn.1	RTA TC
Rat Expression Set 230	1372064_PM_at	-	-
Rat Expression Set 230	1372064_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10744460	-	-
Rat Genome U34 Set	rc_AI233696_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21341724	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1530471	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366721	-	-