Rn01496565_m1 Best Coverage

• Gene Symbol: Nthl1
• Gene Name: nth (endonuclease III)-like 1 (E.coli)
• Gene Aliases: Nth1
• Chromosome Location: Chr.10: 13996660 - 14002827 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nthl1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001105728.1	NP_001099198.1	3 - 4	573		89

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000000214.rn.1

• Set Membership: Amplicon length between 86 and 100, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

DNA metabolism protein, DNA glycosylase, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

DNA catabolic process, endonucleolytic
base-excision repair, AP site formation
nucleotide-excision repair, DNA incision, 5'-to lesion

Function(s)

double-stranded DNA binding
DNA-(apurinic or apyrimidinic site) lyase activity
DNA N-glycosylase activity
4 iron, 4 sulfur cluster binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P254687	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	514639	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	295950	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	354548	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	586070	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	42712	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P254687	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P254687	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P254687	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P254687	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10732162	-	-
Affymetrix Rat Gene 1.0 ST Array	10732166	-	-
Affymetrix Rat Gene 1.0 ST Array	10732163	-	-
Affymetrix Rat Gene 1.0 ST Array	10732164	-	-
Affymetrix Rat Gene 1.0 ST Array	10732165	-	-
Affymetrix Rat Gene 1.0 ST Array	10732161	-	-
Affymetrix Rat Gene 1.1 ST Array	10732160	-	-
Rat Genome 230 2.0 Array	1376553_at	-	-
Rat Genome 230 2.0 Array	1393963_PM_at	-	-
Rat Genome 230 2.0 Array	1376553_PM_at	-	-
Rat Genome 230 2.0 Array	1393963_at	-	-
Affymetrix HT Rat Focus Array	1393963_PM_at	-	-
Affymetrix HT Rat Focus Array	1376553_PM_at	-	-
Affymetrix HT Rat Focus Array	1376553_at	-	-
Affymetrix HT Rat Focus Array	1393963_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000002037.rn.1	TC1000000214.rn.1	RTA TC
Rat Expression Set 230	1376553_PM_at	-	-
Rat Expression Set 230	1393963_PM_at	-	-
Rat Expression Set 230	1393963_at	-	-
Rat Expression Set 230	1376553_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10732160	-	-
Rat Genome U34 Set	rc_H33255_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20880494	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360860	-	-