Rn01497101_m1 Best Coverage

• Gene Symbol: Pipox
• Gene Name: pipecolic acid oxidase
• Gene Aliases: -
• Chromosome Location: Chr.10: 64951986 - 64964865 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pipox
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001012009.1	NP_001012009.1	1 - 2	117		78
	XM_006246958.1	XP_006247020.1	2 - 3	253		78
	XM_006246959.1	XP_006247021.1	1 - 2	441		78
GenBank mRNA	BC088249.1	-	1 - 2	117	7370364	78

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000001142.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pipox

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Process(es)

L-lysine catabolic process to acetyl-CoA via L-pipecolate
tetrahydrofolate metabolic process
oxidation-reduction process

Function(s)

receptor binding
sarcosine oxidase activity
L-pipecolate oxidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P004307	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	534656	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	785842	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	503487	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	712720	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	357170	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	37366	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	487522	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	451933	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	208275	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P004307	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P004307	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P004307	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P103312	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	7696	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10745055	-	-
Affymetrix Rat Gene 1.0 ST Array	10745052	-	-
Affymetrix Rat Gene 1.0 ST Array	10745054	-	-
Affymetrix Rat Gene 1.0 ST Array	10745053	-	-
Affymetrix Rat Gene 1.0 ST Array	10745058	-	-
Affymetrix Rat Gene 1.0 ST Array	10745056	-	-
Affymetrix Rat Gene 1.0 ST Array	10745059	-	-
Affymetrix Rat Gene 1.0 ST Array	10745057	-	-
Affymetrix Rat Gene 1.1 ST Array	10745051	-	-
Affymetrix Rat Clariom S Assay	PSR1000010342.rn.1	TC1000001142.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000010343.rn.1	TC1000001142.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10745051	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20697283	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1375302	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376549	-	-