Rn01497206_m1

• Gene Symbol: Jmjd6
• Gene Name: jumonji domain containing 6
• Gene Aliases: Ptdsr
• Chromosome Location: Chr.10: 105781752 - 105787803 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Jmjd6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001012143.2	NP_001012143.2	2 - 3	807		102
	XM_006247806.1	XP_006247868.1	2 - 3	640		102
GenBank mRNA	BC079012.1	-	2 - 3	807	7113380	102

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000004174.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Jmjd6

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Process(es)

blood vessel development
kidney development
sprouting angiogenesis
transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA processing
cell surface receptor signaling pathway
heart development
biological_process
RNA splicing
peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
lung development
T cell differentiation in thymus
macrophage activation
apoptotic cell clearance
recognition of apoptotic cell
regulation of mRNA splicing, via spliceosome
erythrocyte development
oxidation-reduction process
retina development in camera-type eye
histone H3-R2 demethylation
histone H4-R3 demethylation

Function(s)

molecular_function
single-stranded RNA binding
receptor activity
iron ion binding
histone demethylase activity (H3-R2 specific)
histone demethylase activity (H4-R3 specific)
identical protein binding
peptidyl-lysine 5-dioxygenase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1000038148.rn.1	TC1000004174.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000038149.rn.1	TC1000004174.rn.1	RTA TC