Rn01497468_m1

• Gene Symbol: Pcdh11x
• Gene Name: protocadherin 11 X-linked
• Gene Aliases: RGD1562864
• Chromosome Location: Chr.X: 92596314 - 93341412 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pcdh11x
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001271228.1	NP_001258157.1	2 - 3	903		95
	XM_008773375.1	XP_008771597.1	2 - 3	950		95

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00000822.rn.1

• Set Membership: Amplicon length between 86 and 100, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
negative regulation of phosphatase activity

Function(s)

calcium ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P165541	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P165548	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P165548	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P165541	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P165541	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P165548	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P165541	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P165548	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P218059	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P550938	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10934791	-	-
Affymetrix Rat Gene 1.0 ST Array	10934783	-	-
Affymetrix Rat Gene 1.1 ST Array	10934782	-	-
Affymetrix Rat Clariom S Assay	PSR0X00004949.rn.1	TC0X00000822.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00004948.rn.1	TC0X00000822.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00004950.rn.1	TC0X00000822.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00004946.rn.1	TC0X00000822.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00004947.rn.1	TC0X00000822.rn.1	RTA TC
Affymetrix Rat Gene 1.0 ST Array	10934782	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21629300	-	-
ABI Rat Genome Survey Microarray	21662959	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1364916	-	-
RatRef-12 Expression BeadChip	ILMN_69729	-	-