Rn01498374_m1 Best Coverage

• Gene Symbol: Btaf1
• Gene Name: BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
• Gene Aliases: RGD1564130
• Chromosome Location: Chr.1: 255564199 - 255654932 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Btaf1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191917.1	NP_001178846.1	37 - 38	5424		63
	XM_006231332.2	XP_006231394.1	37 - 38	5710		63
	XM_006231334.1	XP_006231396.1	34 - 35	5086		63

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100003539.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of chromatin binding

Function(s)

DNA binding
ATP binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P833405	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P007298	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P833405	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P007298	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P833405	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P007298	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P007298	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P833405	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P445476	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P22076	-	-

Array Name	Probe IDs	Targets	Target Type
Rat Genome 230 2.0 Array	1373467_PM_at	-	-
Rat Genome 230 2.0 Array	1373467_at	-	-
Affymetrix HT Rat Focus Array	1373467_PM_at	-	-
Affymetrix HT Rat Focus Array	1373467_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100028751.rn.1	TC0100003539.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100028750.rn.1	TC0100003539.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100028748.rn.1	TC0100003539.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100028749.rn.1	TC0100003539.rn.1	RTA TC
Rat Expression Set 230	1373467_PM_at	-	-
Rat Expression Set 230	1373467_at	-	-
Rat Genome U34 Set	rc_AA818039_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20807836	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1370131	-	-
RatRef-12 Expression BeadChip	ILMN_53908	-	-