Rn01498495_g1

Gene Symbol:

Capns1 LOC100912380

Gene Name:

calpain, small subunit 1

calpain small subunit 1-like

Gene Aliases:

Capn4

-

Chromosome Location:

Chr.1: 90918124 - 91071025 on Build Rnor_6.0

Chromosome Location:

Chr.1: 88652448 - 88656835 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Capns1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017118.1	NP_058814.1	8 - 9	781		86
GenBank mRNA	BC098068.1	-	8 - 9	781		86
	FQ229527.1	-		464		86
	U10861.1	-		470		86
	U53859.1	-	7 - 8	717		86

Gene Symbol: LOC100912380
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_006228796.2	XP_006228858.2		557		86

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005139.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Capns1
Click here to find siRNAs for Gene LOC100912380

Gene Ontology Categories:

Process(es)

proteolysis

Function(s)

calcium-dependent cysteine-type endopeptidase activity
calcium ion binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0100041141.rn.1	TC0100005139.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100041137.rn.1	TC0100005139.rn.1	RTA TC