Rn01498841_m1 Best Coverage

• Gene Symbol: Itgb1bp1
• Gene Name: integrin beta 1 binding protein 1
• Gene Aliases: -
• Chromosome Location: Chr.6: 43348927 - 43363630 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Itgb1bp1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001106719.2	NP_001100189.1	4 - 5	424		68
	XM_006239979.2	XP_006240041.1	3 - 4	340		68
	XM_006239980.2	XP_006240042.1	4 - 5	369		68
	XM_006239981.2	XP_006240043.1	3 - 4	551		68
GenBank mRNA	BC169104.1	-	4 - 5	424	7386477	68
	FQ215419.1	-	3 - 4	259		68
	FQ218542.1	-	3 - 4	301		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002208.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

blood vessel endothelial cell proliferation involved in sprouting angiogenesis
negative regulation of protein kinase activity
negative regulation of cell adhesion involved in substrate-bound cell migration
cell-matrix adhesion
integrin-mediated signaling pathway
positive regulation of cell proliferation
negative regulation of cell proliferation
positive regulation of endothelial cell migration
negative regulation of fibroblast migration
protein transport
negative regulation of protein binding
activation of protein kinase B activity
integrin activation
regulation of cell adhesion mediated by integrin
tube formation
cellular response to vascular endothelial growth factor stimulus
receptor clustering
cellular response to fibroblast growth factor stimulus
positive regulation of Notch signaling pathway
positive regulation of transcription from RNA polymerase II promoter
regulation of blood vessel size
myoblast migration
positive regulation of stress fiber assembly
positive regulation of focal adhesion assembly
negative regulation of focal adhesion assembly
positive regulation of protein kinase B signaling
negative regulation of ERK1 and ERK2 cascade
negative regulation of cell migration involved in sprouting angiogenesis
positive regulation of protein targeting to membrane
negative regulation of protein targeting to membrane
negative regulation of substrate adhesion-dependent cell spreading
regulation of integrin-mediated signaling pathway

Function(s)

GDP-dissociation inhibitor activity
integrin binding
protein transporter activity
kinase binding
protein kinase binding
protein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0600015963.rn.1	TC0600002208.rn.1	RTA TC