Rn01499367_m1 Best Coverage

• Gene Symbol: Hpd
• Gene Name: 4-hydroxyphenylpyruvate dioxygenase
• Gene Aliases: -
• Chromosome Location: Chr.12: 38828606 - 38839956 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hpd
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017233.1	NP_058929.1	11 - 12	864		57
GenBank mRNA	AF082834.1	-	11 - 12	864		57
	BC081819.1	-	11 - 12	862		57
	FQ209393.1	-	10 - 11	1020		57
	FQ209489.1	-	10 - 11	825		57
	FQ210905.1	-	11 - 12	872		57
	FQ218378.1	-	11 - 12	873		57
	FQ218745.1	-	11 - 12	872		57
	FQ219696.1	-	11 - 12	872		57
	M18405.1	-	10 - 11	820		57

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000625.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hpd

Gene Ontology Categories:

Process(es)

L-phenylalanine catabolic process
tyrosine catabolic process

Function(s)

4-hydroxyphenylpyruvate dioxygenase activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P179986	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	509128	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	81738	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	757859	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	764139	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	660514	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	515136	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	678161	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	143256	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	129100	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P179986	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P179986	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P179986	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P179986	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701579425	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	73896	-	-
Agilent Rat cDNA Microarray (G4105A)	701579425	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10758469	-	-
Affymetrix Rat Gene 1.0 ST Array	10758460	-	-
Affymetrix Rat Gene 1.0 ST Array	10758471	-	-
Affymetrix Rat Gene 1.0 ST Array	10758468	-	-
Affymetrix Rat Gene 1.0 ST Array	10758459	-	-
Affymetrix Rat Gene 1.0 ST Array	10758462	-	-
Affymetrix Rat Gene 1.0 ST Array	10758464	-	-
Affymetrix Rat Gene 1.0 ST Array	10758470	-	-
Affymetrix Rat Gene 1.0 ST Array	10758467	-	-
Affymetrix Rat Gene 1.0 ST Array	10758465	-	-
Affymetrix Rat Gene 1.0 ST Array	10758461	-	-
Affymetrix Rat Gene 1.0 ST Array	10758463	-	-
Affymetrix Rat Gene 1.0 ST Array	10758466	-	-
Affymetrix Rat Gene 1.1 ST Array	10758457	-	-
Rat Genome 230 2.0 Array	1368188_PM_at	-	-
Rat Genome 230 2.0 Array	1368188_at	-	-
Affymetrix HT Rat Focus Array	1368188_at	-	-
Affymetrix HT Rat Focus Array	1368188_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200005465.rn.1	TC1200000625.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200005467.rn.1	TC1200000625.rn.1	RTA TC
Rat Expression Set 230	1368188_PM_at	-	-
Rat Expression Set 230	1368188_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10758457	-	-
Rat Genome U34 Set	rc_AA866302_g_at	-	-
Rat Genome U34 Set	rc_AA866302_at	-	-
Rat Genome U34 Set	AF082834_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21347308	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1363200	-	-
RatRef-12 Expression BeadChip	ILMN_69721	-	-