Rn01499841_m1 Best Coverage

• Gene Symbol: Rabgef1
• Gene Name: RAB guanine nucleotide exchange factor (GEF) 1
• Gene Aliases: -
• Chromosome Location: Chr.12: 29960122 - 30004709 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rabgef1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108333.1	NP_001101803.1	4 - 5	835		80
	XM_006249238.2	XP_006249300.1	5 - 6	930		80
	XM_006249239.2	XP_006249301.1	5 - 6	682		80
	XM_006249240.2	XP_006249302.1	5 - 6	919		80
	XM_008769150.1	XP_008767372.1	5 - 6	926		80
GenBank mRNA	BC168697.1	-	2 - 3	234		80

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001430.rn.1

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

guanyl-nucleotide exchange factor

Gene Ontology Categories:

Process(es)

negative regulation of protein phosphorylation
negative regulation of leukocyte migration
protein targeting to membrane
protein ubiquitination
negative regulation of mast cell activation
negative regulation of mast cell degranulation
negative regulation of Ras protein signal transduction
negative regulation of receptor-mediated endocytosis
negative regulation of inflammatory response
regulation of Fc receptor mediated stimulatory signaling pathway
negative regulation of interleukin-6 secretion
negative regulation of Kit signaling pathway

Function(s)

DNA binding
ubiquitin-protein transferase activity
zinc ion binding
Rab guanyl-nucleotide exchange factor activity
Rab GTPase binding
ubiquitin protein ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1200012081.rn.1	TC1200001430.rn.1	RTA TC