Rn01499842_m1

• Gene Symbol: Rabgef1
• Gene Name: RAB guanine nucleotide exchange factor (GEF) 1
• Gene Aliases: -
• Chromosome Location: Chr.12: 29960122 - 30004709 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rabgef1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108333.1	NP_001101803.1	5 - 6	968		93
	XM_006249238.2	XP_006249300.1	6 - 7	1063		93
	XM_006249239.2	XP_006249301.1	6 - 7	815		93
	XM_006249240.2	XP_006249302.1	6 - 7	1052		93
	XM_008769150.1	XP_008767372.1	6 - 7	1059		93
GenBank mRNA	BC168697.1	-	3 - 4	367		93

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001430.rn.1

• Set Membership: Amplicon length between 86 and 100, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

guanyl-nucleotide exchange factor

Gene Ontology Categories:

Process(es)

negative regulation of protein phosphorylation
negative regulation of leukocyte migration
protein targeting to membrane
protein ubiquitination
negative regulation of mast cell activation
negative regulation of mast cell degranulation
negative regulation of Ras protein signal transduction
negative regulation of receptor-mediated endocytosis
negative regulation of inflammatory response
regulation of Fc receptor mediated stimulatory signaling pathway
negative regulation of interleukin-6 secretion
negative regulation of Kit signaling pathway

Function(s)

DNA binding
ubiquitin-protein transferase activity
zinc ion binding
Rab guanyl-nucleotide exchange factor activity
Rab GTPase binding
ubiquitin protein ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1200012078.rn.1	TC1200001430.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200012079.rn.1	TC1200001430.rn.1	RTA TC