Rn01500062_m1 Best Coverage

• Gene Symbol: Ccdc62
• Gene Name: coiled-coil domain containing 62
• Gene Aliases: -
• Chromosome Location: Chr.12: 38057532 - 38093918 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ccdc62
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001134766.1	NP_001128238.1	6 - 7	896		102
	XM_006249355.2	XP_006249417.1	6 - 7	1764		102
	XM_006249356.2	XP_006249418.1	6 - 7	1710		102
	XM_006249357.2	XP_006249419.1	6 - 7	1764		102
	XM_006249358.1	XP_006249420.1	6 - 7	837		102
	XM_008769265.1	XP_008767487.1	5 - 6	649		102
GenBank mRNA	BC086549.1	-	2 - 3	300		102
	BC099139.1	-	2 - 3	175		102

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001547.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

positive regulation of transcription from RNA polymerase II promoter
cellular response to estradiol stimulus

Function(s)

estrogen receptor binding
ligand-dependent nuclear receptor transcription coactivator activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR1200013097.rn.1	TC1200001547.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200013098.rn.1	TC1200001547.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200013099.rn.1	TC1200001547.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200013100.rn.1	TC1200001547.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200013101.rn.1	TC1200001547.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200013102.rn.1	TC1200001547.rn.1	RTA TC