Rn01502607_g1 Best Coverage

• Gene Symbol: Stac3
• Gene Name: SH3 and cysteine rich domain 3
• Gene Aliases: -
• Chromosome Location: Chr.7: 70807426 - 70815271 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Stac3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001130558.1	NP_001124030.1	11 - 12	1115		66
	XM_006241486.2	XP_006241548.1	11 - 12	1628		66
	XM_006241488.2	XP_006241550.1	10 - 11	1560		66
	XM_008765415.1	XP_008763637.1	11 - 12	1050		66
GenBank mRNA	FQ216646.1	-	10 - 11	939		66
	FQ224725.1	-	1 - 2	100		66

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700000901.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

skeletal muscle contraction
neuromuscular synaptic transmission
intracellular signal transduction
skeletal muscle fiber development

Function(s)

identical protein binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1045734	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	78854	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	869594	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	10281	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	217873	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	807645	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	710200	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	35251	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1045734	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1045734	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1045734	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1045734	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10895926	-	-
Affymetrix Rat Gene 1.0 ST Array	10895918	-	-
Affymetrix Rat Gene 1.0 ST Array	10895916	-	-
Affymetrix Rat Gene 1.0 ST Array	10895920	-	-
Affymetrix Rat Gene 1.0 ST Array	10895921	-	-
Affymetrix Rat Gene 1.0 ST Array	10895919	-	-
Affymetrix Rat Gene 1.0 ST Array	10895917	-	-
Affymetrix Rat Gene 1.0 ST Array	10895923	-	-
Affymetrix Rat Gene 1.0 ST Array	10895922	-	-
Affymetrix Rat Gene 1.0 ST Array	10895924	-	-
Affymetrix Rat Gene 1.0 ST Array	10895925	-	-
Affymetrix Rat Gene 1.1 ST Array	10895915	-	-
Rat Genome 230 2.0 Array	1395403_at	-	-
Rat Genome 230 2.0 Array	1395403_PM_at	-	-
Affymetrix HT Rat Focus Array	1395403_at	-	-
Affymetrix HT Rat Focus Array	1395403_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700006865.rn.1	TC0700000901.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700006867.rn.1	TC0700000901.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700006866.rn.1	TC0700000901.rn.1	RTA TC
Rat Expression Set 230	1395403_at	-	-
Rat Expression Set 230	1395403_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10895915	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21158242	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353485	-	-