Rn01505431_m1 Best Coverage

• Gene Symbol: Ptp4a3
• Gene Name: protein tyrosine phosphatase type IVA, member 3
• Gene Aliases: -
• Chromosome Location: Chr.7: 114971214 - 115002902 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptp4a3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001114405.2	NP_001107877.1	2 - 3	691		53
	XM_006241729.2	XP_006241791.1	4 - 5	1188		53
	XM_006241731.2	XP_006241793.1	3 - 4	2298		53
	XM_006241732.2	XP_006241794.1	3 - 4	1110		53
	XM_006241733.2	XP_006241795.1	3 - 4	1069		53
	XM_008765573.1	XP_008763795.1	4 - 5	2376		53
	XM_008765574.1	XP_008763796.1	3 - 4	1755		53
GenBank mRNA	BC159432.1	-	2 - 3	691		53

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001278.rn.1

• Set Membership: Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

peptidyl-tyrosine dephosphorylation
positive regulation of vascular permeability
endothelial cell migration
regulation of vascular endothelial growth factor signaling pathway

Function(s)

protein tyrosine phosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P391926	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	964583	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	752943	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	881047	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	6965	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P391926	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P391926	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P391926	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P391926	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10897002	-	-
Affymetrix Rat Gene 1.0 ST Array	10897001	-	-
Affymetrix Rat Gene 1.0 ST Array	10896999	-	-
Affymetrix Rat Gene 1.0 ST Array	10897003	-	-
Affymetrix Rat Gene 1.0 ST Array	10897000	-	-
Affymetrix Rat Gene 1.1 ST Array	10896992	-	-
Rat Genome 230 2.0 Array	1372084_at	-	-
Rat Genome 230 2.0 Array	1372084_PM_at	-	-
Affymetrix HT Rat Focus Array	1372084_at	-	-
Affymetrix HT Rat Focus Array	1372084_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700009272.rn.1	TC0700001278.rn.1	RTA TC
Rat Expression Set 230	1372084_PM_at	-	-
Rat Expression Set 230	1372084_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10896992	-	-
Rat Genome U34 Set	rc_AA818033_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22161761	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357473	-	-