Rn01505455_m1

• Gene Symbol: Apobec3b
• Gene Name: apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
• Gene Aliases: Apobec3, Apobec3f
• Chromosome Location: Chr.7: 121108114 - 121128346 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apobec3b
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001033703.1	NP_001028875.1	1 - 2	144		97
	XM_008765716.1	XP_008763938.1	1 - 2	1280		97
GenBank mRNA	BC101878.1	-	1 - 2	144	7929998	97

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001464.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apobec3b

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

hematopoietic progenitor cell differentiation
metabolic process
negative regulation of transposition
negative regulation of viral genome replication
innate immune response
defense response to virus

Function(s)

zinc ion binding
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
poly(A) RNA binding
deoxycytidine deaminase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P415193	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	302679	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	935312	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	489258	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	358463	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	285049	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	60665	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	649898	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	135267	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	861158	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	573068	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	172219	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	491843	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	453203	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	179463	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	162977	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	69821	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	140079	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P415193	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P415193	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P415193	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P415193	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	103026	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	19918	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10897727	-	-
Affymetrix Rat Gene 1.0 ST Array	10897725	-	-
Affymetrix Rat Gene 1.0 ST Array	10897733	-	-
Affymetrix Rat Gene 1.0 ST Array	10897731	-	-
Affymetrix Rat Gene 1.0 ST Array	10897730	-	-
Affymetrix Rat Gene 1.0 ST Array	10897726	-	-
Affymetrix Rat Gene 1.0 ST Array	10897724	-	-
Affymetrix Rat Gene 1.0 ST Array	10897728	-	-
Affymetrix Rat Gene 1.0 ST Array	10897732	-	-
Affymetrix Rat Gene 1.1 ST Array	10897723	-	-
Rat Genome 230 2.0 Array	1392810_PM_at	-	-
Rat Genome 230 2.0 Array	1392810_at	-	-
Affymetrix HT Rat Focus Array	1392810_PM_at	-	-
Affymetrix HT Rat Focus Array	1392810_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700010972.rn.1	TC0700001464.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700010974.rn.1	TC0700001464.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700010971.rn.1	TC0700001464.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700010973.rn.1	TC0700001464.rn.1	RTA TC
Rat Expression Set 230	1392810_PM_at	-	-
Rat Expression Set 230	1392810_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10897723	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22001644	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353663	-	-