Rn01506130_m1 Best Coverage

• Gene Symbol: Ndrg1
• Gene Name: N-myc downstream regulated 1
• Gene Aliases: Ndr1
• Chromosome Location: Chr.7: 107734323 - 107775701 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ndrg1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001011991.1	NP_001011991.1	15 - 16	1085		73
	XM_006241708.2	XP_006241770.1	15 - 16	1357		73
GenBank mRNA	AY500369.1	-	15 - 16	1047		73
	BC081898.1	-	15 - 16	1085	7110455	73
	FQ212154.1	-	15 - 16	1097		73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700003277.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ndrg1

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Process(es)

DNA damage response, signal transduction by p53 class mediator
peripheral nervous system myelin maintenance
mast cell activation
cellular response to hypoxia

Function(s)

microtubule binding
Rab GTPase binding
gamma-tubulin binding
cadherin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P425380	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	77458	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	914713	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	929117	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	43763	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	8152	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	694473	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	606423	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	80320	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	217037	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	535701	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	583586	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	857390	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	247868	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	919073	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	120555	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	102000	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	832815	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	12483	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	806535	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	939218	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	555205	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	844318	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	140824	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	425237	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	14800	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	915564	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	649935	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	509300	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	689777	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	139498	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	140745	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	61321	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	63993	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	35342	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P425380	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P425380	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P425380	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P229800	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P425380	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8890	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	32308	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	98978	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	53063	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10904188	-	-
Affymetrix Rat Gene 1.0 ST Array	10904171	-	-
Affymetrix Rat Gene 1.0 ST Array	10904182	-	-
Affymetrix Rat Gene 1.0 ST Array	10904179	-	-
Affymetrix Rat Gene 1.0 ST Array	10904178	-	-
Affymetrix Rat Gene 1.0 ST Array	10904170	-	-
Affymetrix Rat Gene 1.0 ST Array	10904180	-	-
Affymetrix Rat Gene 1.0 ST Array	10904173	-	-
Affymetrix Rat Gene 1.0 ST Array	10904183	-	-
Affymetrix Rat Gene 1.0 ST Array	10904175	-	-
Affymetrix Rat Gene 1.0 ST Array	10904184	-	-
Affymetrix Rat Gene 1.0 ST Array	10904176	-	-
Affymetrix Rat Gene 1.0 ST Array	10904177	-	-
Affymetrix Rat Gene 1.0 ST Array	10904172	-	-
Affymetrix Rat Gene 1.0 ST Array	10904186	-	-
Affymetrix Rat Gene 1.0 ST Array	10904185	-	-
Affymetrix Rat Gene 1.0 ST Array	10904181	-	-
Affymetrix Rat Gene 1.0 ST Array	10904174	-	-
Affymetrix Rat Gene 1.1 ST Array	10904169	-	-
Rat Genome 230 2.0 Array	1391458_at	-	-
Rat Genome 230 2.0 Array	1371360_at	-	-
Rat Genome 230 2.0 Array	1371360_PM_at	-	-
Rat Genome 230 2.0 Array	1391458_PM_at	-	-
Affymetrix HT Rat Focus Array	1371360_at	-	-
Affymetrix HT Rat Focus Array	1371360_PM_at	-	-
Affymetrix HT Rat Focus Array	1391458_at	-	-
Affymetrix HT Rat Focus Array	1391458_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700024929.rn.1	TC0700003277.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0700024930.rn.1	TC0700003277.rn.1	RTA TC
Rat Expression Set 230	1371360_at	-	-
Rat Expression Set 230	1371360_PM_at	-	-
Rat Expression Set 230	1391458_at	-	-
Rat Expression Set 230	1391458_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10904169	-	-
Rat Genome U34 Set	rc_AI178504_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21942427	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_2040297	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376230	-	-