Rn01506329_m1 Best Coverage

• Gene Symbol: Capn5
• Gene Name: calpain 5
• Gene Aliases: Htra3
• Chromosome Location: Chr.1: 163073134 - 163129771 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Capn5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_134461.1	NP_604456.1	9 - 10	1398		79
	XM_006229729.2	XP_006229791.2	9 - 10	1635		79
	XM_006229730.2	XP_006229792.1	9 - 10	1527		79
	XM_006229731.2	XP_006229793.1	9 - 10	1771		79
	XM_008759673.1	XP_008757895.1	8 - 9	1562		79
GenBank mRNA	AF484958.1	-	9 - 10	1398		79
	FQ223532.1	-	9 - 10	1492		79

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006085.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Capn5

Gene Ontology Categories:

Process(es)

ovarian follicle development
luteinization
proteolysis
granulosa cell differentiation

Function(s)

molecular_function
calcium-dependent cysteine-type endopeptidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0100048317.rn.1	TC0100006085.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100048319.rn.1	TC0100006085.rn.1	RTA TC