Rn01507818_m1 Best Coverage

• Gene Symbol: Ppp4c
• Gene Name: protein phosphatase 4, catalytic subunit
• Gene Aliases: Ppx
• Chromosome Location: Chr.1: 198219012 - 198225775 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ppp4c
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_134359.1	NP_599186.1	6 - 7	786		88
	XM_006230206.1	XP_006230268.1	7 - 8	782		88
GenBank mRNA	BC091574.1	-	6 - 7	786	7135215	88
	FQ216602.1	-	7 - 8	742		88

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006675.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Protein Phosphatase, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ppp4c

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Process(es)

regulation of double-strand break repair via homologous recombination
dephosphorylation
cellular response to interleukin-1

Function(s)

protein serine/threonine phosphatase activity
lamin binding
phosphatase activity
protein complex binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P025186	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	587338	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	248275	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	103490	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	524210	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	802	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P025186	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P025186	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P025186	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P550378	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	28898	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10725828	-	-
Affymetrix Rat Gene 1.0 ST Array	10725825	-	-
Affymetrix Rat Gene 1.0 ST Array	10725827	-	-
Affymetrix Rat Gene 1.0 ST Array	10725829	-	-
Affymetrix Rat Gene 1.0 ST Array	10725824	-	-
Affymetrix Rat Gene 1.0 ST Array	10725826	-	-
Affymetrix Rat Gene 1.0 ST Array	10725831	-	-
Affymetrix Rat Gene 1.0 ST Array	10725830	-	-
Affymetrix Rat Gene 1.1 ST Array	10725823	-	-
Rat Genome 230 2.0 Array	1390333_PM_at	-	-
Rat Genome 230 2.0 Array	1390333_at	-	-
Affymetrix HT Rat Focus Array	1390333_PM_at	-	-
Affymetrix HT Rat Focus Array	1390333_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100052403.rn.1	TC0100006675.rn.1	RTA TC
Rat Expression Set 230	1390333_at	-	-
Rat Expression Set 230	1390333_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10725823	-	-
Rat Genome U34 Set	rc_AA957050_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21308957	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1359895	-	-