Rn01510187_m1 Best Coverage

• Gene Symbol: Spns1
• Gene Name: spinster homolog 1 (Drosophila)
• Gene Aliases: RGD1305613
• Chromosome Location: Chr.1: 197771196 - 197778475 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Spns1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001039208.2	NP_001034297.2	5 - 6	1011		104
GenBank mRNA	BC110048.1	-	5 - 6	996	7315879	104
	BU671623.1	-	2 - 3	194		104
	CA339235.1	-	5 - 6	584		104

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006651.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Transporter, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

sphingosine-1-phosphate signaling pathway
lipid transport
locomotion
transmembrane transport

Function(s)

sphingolipid transporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P281193	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	414693	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	122660	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	36171	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	641588	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	901174	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	90292	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	849799	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	164514	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	593177	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	755693	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	841243	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	78213	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	49416	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	34009	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	88671	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	45484	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P281193	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P281193	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P281193	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	23747	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	83376	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10725668	-	-
Affymetrix Rat Gene 1.0 ST Array	10725665	-	-
Affymetrix Rat Gene 1.0 ST Array	10725667	-	-
Affymetrix Rat Gene 1.0 ST Array	10725669	-	-
Affymetrix Rat Gene 1.0 ST Array	10725664	-	-
Affymetrix Rat Gene 1.0 ST Array	10725674	-	-
Affymetrix Rat Gene 1.0 ST Array	10725663	-	-
Affymetrix Rat Gene 1.0 ST Array	10725662	-	-
Affymetrix Rat Gene 1.0 ST Array	10725661	-	-
Affymetrix Rat Gene 1.0 ST Array	10725660	-	-
Affymetrix Rat Gene 1.0 ST Array	10725673	-	-
Affymetrix Rat Gene 1.0 ST Array	10725672	-	-
Affymetrix Rat Gene 1.0 ST Array	10725671	-	-
Affymetrix Rat Gene 1.0 ST Array	10725666	-	-
Affymetrix Rat Gene 1.0 ST Array	10725670	-	-
Affymetrix Rat Gene 1.1 ST Array	10725659	-	-
Rat Genome 230 2.0 Array	1388675_at	-	-
Rat Genome 230 2.0 Array	1388675_PM_at	-	-
Affymetrix HT Rat Focus Array	1388675_PM_at	-	-
Affymetrix HT Rat Focus Array	1388675_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100052048.rn.1	TC0100006651.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100052051.rn.1	TC0100006651.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100052049.rn.1	TC0100006651.rn.1	RTA TC
Rat Expression Set 230	1388675_at	-	-
Rat Expression Set 230	1388675_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10725659	-	-
Rat Genome U34 Set	rc_AI059164_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21085823	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1374856	-	-