Rn01510333_m1 Best Coverage

• Gene Symbol: Palb2
• Gene Name: partner and localizer of BRCA2
• Gene Aliases: RGD1304759
• Chromosome Location: Chr.1: 192064586 - 192088547 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Palb2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191603.1	NP_001178532.1	12 - 13	3126		73
	XM_008759711.1	XP_008757933.1	10 - 11	4302		73
	XM_008759712.1	XP_008757934.1	11 - 12	3210		73
	XM_008759713.1	XP_008757935.1	11 - 12	3120		73
GenBank mRNA	FQ211178.1	-	12 - 13	3275		73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100006559.rn.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Probe spans exons

Gene Ontology Categories:

Process(es)

double-strand break repair via homologous recombination
somitogenesis
inner cell mass cell proliferation
mesoderm development
biological_process
organ morphogenesis
post-anal tail morphogenesis
negative regulation of apoptotic process

Function(s)

molecular_function
DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1021489	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1021489	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1021489	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1021489	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1021489	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10725482	-	-
Affymetrix Rat Gene 1.0 ST Array	10725484	-	-
Affymetrix Rat Gene 1.0 ST Array	10725485	-	-
Affymetrix Rat Gene 1.0 ST Array	10725486	-	-
Affymetrix Rat Gene 1.0 ST Array	10725492	-	-
Affymetrix Rat Gene 1.0 ST Array	10725490	-	-
Affymetrix Rat Gene 1.0 ST Array	10725493	-	-
Affymetrix Rat Gene 1.0 ST Array	10725481	-	-
Affymetrix Rat Gene 1.0 ST Array	10725487	-	-
Affymetrix Rat Gene 1.0 ST Array	10725488	-	-
Affymetrix Rat Gene 1.0 ST Array	10725483	-	-
Affymetrix Rat Gene 1.0 ST Array	10725489	-	-
Rat Genome 230 2.0 Array	1376695_at	-	-
Rat Genome 230 2.0 Array	1376695_PM_at	-	-
Affymetrix HT Rat Focus Array	1376695_PM_at	-	-
Affymetrix HT Rat Focus Array	1376695_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100051511.rn.1	TC0100006559.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100051512.rn.1	TC0100006559.rn.1	RTA TC
Rat Expression Set 230	1376695_PM_at	-	-
Rat Expression Set 230	1376695_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10725480	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21954213	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1368829	-	-
RatRef-12 Expression BeadChip	ILMN_53548	-	-