Rn01511686_g1 Best Coverage

• Gene Symbol: Hsp90ab1
• Gene Name: heat shock protein 90 alpha (cytosolic), class B member 1
• Gene Aliases: HSP90-BETA, HSP90B, HSPC2, Hspcb
• Chromosome Location: Chr.9: 17817791 - 17823163 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hsp90ab1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001004082.3	NP_001004082.3	9 - 10	1778		123
GenBank mRNA	AY695392.1	-	9 - 10	1778		123
	AY695393.1	-	9 - 10	1766		123
	AY724481.1	-	9 - 10	1749		123
	BC082009.1	-	9 - 10	1804		123
	FQ231832.1	-	3 - 4	586		123
	FQ233497.1	-	2 - 3	325		123
	S45392.1	-	9 - 10	1810		123

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900000250.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hsp90ab1

Gene Ontology Categories:

Process(es)

placenta development
protein folding
response to unfolded protein
response to salt stress
positive regulation of protein binding
negative regulation of proteasomal ubiquitin-dependent protein catabolic process
negative regulation of neuron apoptotic process
positive regulation of cell size
regulation of interferon-gamma-mediated signaling pathway
regulation of type I interferon-mediated signaling pathway
cellular response to interleukin-4
cellular response to organic cyclic compound
positive regulation of protein serine/threonine kinase activity

Function(s)

UTP binding
CTP binding
RNA binding
double-stranded RNA binding
protein binding
ATP binding
GTP binding
sulfonylurea receptor binding
kinase binding
protein kinase binding
MHC class II protein complex binding
dATP binding
transmembrane transporter binding
unfolded protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P021862	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P045716	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P140020	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	40799	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	508183	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	648493	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	820663	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	12077	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P140020	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P045716	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P045716	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P140020	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P140020	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P045716	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P116130	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P287194	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10921856	-	-
Affymetrix Rat Gene 1.0 ST Array	10921857	-	-
Affymetrix Rat Gene 1.0 ST Array	10921853	-	-
Affymetrix Rat Gene 1.0 ST Array	10921852	-	-
Affymetrix Rat Gene 1.0 ST Array	10921855	-	-
Affymetrix Rat Gene 1.0 ST Array	10921858	-	-
Affymetrix Rat Gene 1.0 ST Array	10921851	-	-
Affymetrix Rat Gene 1.0 ST Array	10921854	-	-
Affymetrix Rat Gene 1.0 ST Array	10921859	-	-
Affymetrix Rat Gene 1.1 ST Array	10921850	-	-
Rat Genome 230 2.0 Array	1373460_PM_at	-	-
Rat Genome 230 2.0 Array	1375335_PM_at	-	-
Rat Genome 230 2.0 Array	1373460_at	-	-
Rat Genome 230 2.0 Array	1375336_PM_at	-	-
Rat Genome 230 2.0 Array	1375336_at	-	-
Rat Genome 230 2.0 Array	1393555_PM_at	-	-
Rat Genome 230 2.0 Array	1393555_at	-	-
Rat Genome 230 2.0 Array	1375335_at	-	-
Affymetrix HT Rat Focus Array	1375335_at	-	-
Affymetrix HT Rat Focus Array	1375335_PM_at	-	-
Affymetrix HT Rat Focus Array	1393555_at	-	-
Affymetrix HT Rat Focus Array	1393555_PM_at	-	-
Affymetrix HT Rat Focus Array	1375336_PM_at	-	-
Affymetrix HT Rat Focus Array	1375336_at	-	-
Affymetrix Rat Clariom S Assay	PSR0900002358.rn.1	TC0900000250.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900002364.rn.1	TC0900000250.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900002354.rn.1	TC0900000250.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900002361.rn.1	TC0900000250.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900002359.rn.1	TC0900000250.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900002356.rn.1	TC0900000250.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900002352.rn.1	TC0900000250.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900002362.rn.1	TC0900000250.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0900002365.rn.1	TC0900000250.rn.1	RTA TC
Rat Expression Set 230	1375335_at	-	-
Rat Expression Set 230	1375336_at	-	-
Rat Expression Set 230	1375336_PM_at	-	-
Rat Expression Set 230	1375335_PM_at	-	-
Rat Expression Set 230	1393555_PM_at	-	-
Rat Expression Set 230	1393555_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10921850	-	-
Rat Genome U34 Set	rc_AI236795_s_at	-	-
Rat Genome U34 Set	rc_AI008074_s_at	-	-
Rat Genome U34 Set	S45392_at	-	-
Rat Genome U34 Set	rc_AI007820_s_at	-	-
Rat Genome U34 Set	S45392_at	-	-
Rat Genome U34 Set	rc_AI007820_s_at	-	-
Rat Genome U34 Set	rc_AI236795_s_at	-	-
Rat Genome U34 Set	rc_AI008074_s_at	-	-
Rat Genome U34 Set	S45392_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22402584	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1530363	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1354336	-	-
RatRef-12 Expression BeadChip	ILMN_49991	-	-
RatRef-12 Expression BeadChip	ILMN_160703	-	-