Rn01515440_m1 Best Coverage

• Gene Symbol: Prkra
• Gene Name: protein kinase, interferon inducible double stranded RNA dependent activator
• Gene Aliases: RAX
• Chromosome Location: Chr.3: 63489081 - 63507918 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prkra
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001024780.1	NP_001019951.1	7 - 8	911		81
GenBank mRNA	BC097446.1	-	7 - 8	911	7456528	81

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300003371.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prkra

Gene Ontology Categories:

Process(es)

protein phosphorylation
positive regulation of cell proliferation
production of siRNA involved in RNA interference
cellular response to oxidative stress
outer ear morphogenesis
middle ear morphogenesis
skeletal system morphogenesis
positive regulation of intrinsic apoptotic signaling pathway

Function(s)

RNA binding
kinase activity
protein kinase binding
protein homodimerization activity
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P17839	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	351561	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	512326	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	748965	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	615705	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	719654	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	585700	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	318443	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	602884	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	333560	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	43910	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	9837	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	687467	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	501331	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	126854	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	1503	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	140577	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P17839	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P17839	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P17839	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P17839	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	22861	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	45747	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10846334	-	-
Affymetrix Rat Gene 1.0 ST Array	10846339	-	-
Affymetrix Rat Gene 1.0 ST Array	10846333	-	-
Affymetrix Rat Gene 1.0 ST Array	10846337	-	-
Affymetrix Rat Gene 1.0 ST Array	10846336	-	-
Affymetrix Rat Gene 1.0 ST Array	10846338	-	-
Affymetrix Rat Gene 1.0 ST Array	10846332	-	-
Affymetrix Rat Gene 1.0 ST Array	10846335	-	-
Affymetrix Rat Gene 1.1 ST Array	10846331	-	-
Rat Genome 230 2.0 Array	1371899_PM_at	-	-
Rat Genome 230 2.0 Array	1371899_at	-	-
Affymetrix HT Rat Focus Array	1371899_PM_at	-	-
Affymetrix HT Rat Focus Array	1371899_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300026102.rn.1	TC0300003371.rn.1	RTA TC
Rat Expression Set 230	1371899_at	-	-
Rat Expression Set 230	1371899_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10846331	-	-
Rat Genome U34 Set	rc_AI102009_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21337003	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1356119	-	-