Rn01515983_m1

• Gene Symbol: Hmgcl
• Gene Name: 3-hydroxymethyl-3-methylglutaryl-CoA lyase
• Gene Aliases: -
• Chromosome Location: Chr.5: 154294841 - 154308582 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hmgcl
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_024386.1	NP_077362.1	2 - 3	163		85
GenBank mRNA	BC061797.1	-	2 - 3	165	5598033	85
	FQ209392.1	-	2 - 3	161		85
	FQ209616.1	-	2 - 3	167		85
	FQ234382.1	-	2 - 3	161		85
	Y10054.1	-	2 - 3	163		85

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001692.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hmgcl

Panther Classification:

Molecular Function -

lyase

Gene Ontology Categories:

Process(es)

liver development
acyl-CoA metabolic process
mitochondrion organization
response to nutrient
response to starvation
ketone body biosynthetic process
protein tetramerization
response to fatty acid

Function(s)

fatty-acyl-CoA binding
magnesium ion binding
hydroxymethylglutaryl-CoA lyase activity
receptor binding
manganese ion binding
carboxylic acid binding
protein homodimerization activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0500012298.rn.1	TC0500001692.rn.1	RTA TC