Rn01519154_m1

Gene Symbol:

Cda LOC100909857

Gene Name:

cytidine deaminase

cytidine deaminase-like

Gene Aliases:

-

-

Chromosome Location:

Chr.5: 156703579 - 156734541 on Build Rnor_6.0

Chromosome Location:

Chr.5: 156756678 - 156781345 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Cda
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108688.1	NP_001102158.1		368		61

Gene Symbol: LOC100909857
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_003750066.3	XP_003750114.1	3 - 4	385		61

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003901.rn.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Rattus norvegicus, 1700, Probe spans exons

Panther Classification:

Molecular Function -

deaminase

Gene Ontology Categories:

Process(es)

cytidine deamination
response to cycloheximide
cellular response to external biotic stimulus
negative regulation of cell growth
negative regulation of nucleotide metabolic process
protein homotetramerization

Function(s)

cytidine deaminase activity
zinc ion binding
identical protein binding
nucleoside binding
protein homodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P703647	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	67661	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	40560	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	296099	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	786391	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	315188	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	493944	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	145603	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	215193	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	319563	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	468204	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	692080	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	914402	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	272743	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	894571	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	878410	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	864971	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	682680	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	596237	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	496737	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	427080	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	785413	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	382196	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	100453	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	18887	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	14105	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	27333	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	131694	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P703647	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P703647	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P703647	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P703647	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	93003	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10880837	-	-
Affymetrix Rat Gene 1.0 ST Array	10880835	-	-
Affymetrix Rat Gene 1.0 ST Array	10880834	-	-
Affymetrix Rat Gene 1.0 ST Array	10880836	-	-
Affymetrix Rat Gene 1.1 ST Array	10880833	-	-
Rat Genome 230 2.0 Array	1377112_PM_at	-	-
Rat Genome 230 2.0 Array	1377112_at	-	-
Affymetrix HT Rat Focus Array	1377112_at	-	-
Affymetrix HT Rat Focus Array	1377112_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500029311.rn.1	TC0500003901.rn.1	RTA TC
Rat Expression Set 230	1377112_PM_at	-	-
Rat Expression Set 230	1377112_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10880833	-	-
Rat Genome U34 Set	rc_AA859352_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21432108	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365916	-	-