Rn01519905_m1

Gene Symbol:

LOC100911993 Usp48

Gene Name:

ubiquitin carboxyl-terminal hydrolase 48-like

ubiquitin specific peptidase 48

Gene Aliases:

-

Usp31, synUSP

Chromosome Location:

Chr.18: 73409916 - 73439269 on Build Rnor_6.0

Chromosome Location:

Chr.5: 155935105 - 156002722 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: LOC100911993
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_003751808.3	XP_003751856.1	6 - 7	3602		88
	XM_006254970.2	XP_006255032.1	6 - 7	3607		88

Gene Symbol: Usp48
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_198785.1	NP_942080.1	21 - 22	2803		88
	XM_006239234.2	XP_006239296.1	22 - 23	2837		88
	XM_006239235.2	XP_006239297.1	22 - 23	2834		88
	XM_006239236.2	XP_006239298.1	22 - 23	2834		88
	XM_006239237.2	XP_006239299.1	22 - 23	2831		88
GenBank mRNA	AB073880.1	-	21 - 22	2803		88

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001729.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene LOC100911993
Click here to find siRNAs for Gene Usp48

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
protein deubiquitination
proteasome-mediated ubiquitin-dependent protein catabolic process
regulation of proteasomal protein catabolic process

Function(s)

thiol-dependent deubiquitinase
cysteine-type endopeptidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0500012706.rn.1	TC0500001729.rn.1	RTA TC