Rn01520552_m1 Best Coverage

• Gene Symbol: Fblim1
• Gene Name: filamin binding LIM protein 1
• Gene Aliases: Cal
• Chromosome Location: Chr.5: 160122466 - 160158522 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Fblim1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001007554.1	NP_001007555.1	7 - 8	1011		64
	XM_008764273.1	XP_008762495.1	7 - 8	1778		64
	XM_008764274.1	XP_008762496.1	6 - 7	941		64
	XM_008764275.1	XP_008762497.1	7 - 8	1010		64
	XM_008764276.1	XP_008762498.1	7 - 8	1161		64
GenBank mRNA	BC086398.1	-	7 - 8	1011	7303205	64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003962.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Fblim1

Panther Classification:

Molecular Function -

kinase modulator

Gene Ontology Categories:

Process(es)

mRNA processing
biological_process
single organismal cell-cell adhesion
regulation of integrin activation

Function(s)

nucleotide binding
molecular_function
RNA binding
zinc ion binding
filamin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P027921	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	274110	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	846618	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	661958	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	212563	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	531036	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	845842	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	911206	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	343392	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	866775	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	671680	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	195515	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	500751	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	282897	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	319714	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	881014	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	502837	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	815941	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	112639	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	132694	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P027921	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P027921	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P027921	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	22786	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	30596	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	70012	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10881127	-	-
Affymetrix Rat Gene 1.0 ST Array	10881132	-	-
Affymetrix Rat Gene 1.0 ST Array	10881128	-	-
Affymetrix Rat Gene 1.0 ST Array	10881125	-	-
Affymetrix Rat Gene 1.0 ST Array	10881129	-	-
Affymetrix Rat Gene 1.0 ST Array	10881130	-	-
Affymetrix Rat Gene 1.0 ST Array	10881131	-	-
Affymetrix Rat Gene 1.1 ST Array	10881124	-	-
Rat Genome 230 2.0 Array	1373286_PM_at	-	-
Rat Genome 230 2.0 Array	1373286_at	-	-
Affymetrix HT Rat Focus Array	1373286_at	-	-
Affymetrix HT Rat Focus Array	1373286_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500029975.rn.1	TC0500003962.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029974.rn.1	TC0500003962.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029971.rn.1	TC0500003962.rn.1	RTA TC
Rat Expression Set 230	1373286_at	-	-
Rat Expression Set 230	1373286_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10881124	-	-
Rat Genome U34 Set	rc_AA875261_at	-	-
Rat Genome U34 Set	rc_AA996856_f_at	-	-
Rat Genome U34 Set	rc_AA996856_i_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22346674	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1372951	-	-
RatRef-12 Expression BeadChip	ILMN_48965	-	-