Rn01520674_m1 Best Coverage

• Gene Symbol: Rpa2
• Gene Name: replication protein A2
• Gene Aliases: -
• Chromosome Location: Chr.5: 150957041 - 150967597 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rpa2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021582.1	NP_067593.1	8 - 9	811		63
GenBank mRNA	BC079180.1	-	8 - 9	811	7130711	63
	FQ228766.1	-	5 - 6	440		63
	X98490.1	-	7 - 8	717		63

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001609.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rpa2

Gene Ontology Categories:

Process(es)

telomere maintenance
double-strand break repair via homologous recombination
DNA replication
base-excision repair
nucleotide-excision repair
mismatch repair
regulation of double-strand break repair via homologous recombination
mitotic G1 DNA damage checkpoint
regulation of DNA damage checkpoint

Function(s)

DNA binding
damaged DNA binding
single-stranded DNA binding
enzyme binding
protein phosphatase binding
ubiquitin protein ligase binding
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P641107	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	653673	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	932313	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	595815	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	80821	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	599550	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	832841	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	833128	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	109050	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	131581	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P641107	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P641107	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P641107	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P641107	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700373695	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	51427	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	94105	-	-
Agilent Rat cDNA Microarray (G4105A)	700373695	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10880367	-	-
Affymetrix Rat Gene 1.0 ST Array	10880365	-	-
Affymetrix Rat Gene 1.0 ST Array	10880362	-	-
Affymetrix Rat Gene 1.0 ST Array	10880366	-	-
Affymetrix Rat Gene 1.0 ST Array	10880363	-	-
Affymetrix Rat Gene 1.0 ST Array	10880370	-	-
Affymetrix Rat Gene 1.0 ST Array	10880369	-	-
Affymetrix Rat Gene 1.0 ST Array	10880371	-	-
Affymetrix Rat Gene 1.0 ST Array	10880364	-	-
Affymetrix Rat Gene 1.0 ST Array	10880368	-	-
Affymetrix Rat Gene 1.1 ST Array	10880361	-	-
Rat Genome 230 2.0 Array	1388135_at	-	-
Rat Genome 230 2.0 Array	1388135_PM_at	-	-
Affymetrix HT Rat Focus Array	1388135_at	-	-
Affymetrix HT Rat Focus Array	1388135_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500011567.rn.1	TC0500001609.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500011569.rn.1	TC0500001609.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500011568.rn.1	TC0500001609.rn.1	RTA TC
Rat Expression Set 230	1388135_PM_at	-	-
Rat Expression Set 230	1388135_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10880361	-	-
Rat Genome U34 Set	X98490cds_at	-	-
Rat Genome U34 Set	X98490cds_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21762788	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1359929	-	-
RatRef-12 Expression BeadChip	ILMN_68423	-	-