Rn01521927_m1 Best Coverage

• Gene Symbol: Clca1
• Gene Name: chloride channel accessory 1
• Gene Aliases: Clca3
• Chromosome Location: Chr.2: 250897980 - 250923711 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clca1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001107449.1	NP_001100919.1	13 - 14	2365		108

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200004853.rn.1

• Set Membership: Amplicon length greater than or equal to 101, Ion Channel, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

cellular response to hypoxia

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P16403	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	205333	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	134138	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	86871	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	110606	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	822899	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	700826	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	339533	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	389986	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	671422	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	214547	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	382988	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	340448	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	139285	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	403085	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	642253	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	196440	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	312691	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	102809	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	152107	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	9759	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	9802	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	178018	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	24493	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	164974	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P16403	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P16403	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P16403	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P16403	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	43907	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	74441	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10827213	-	-
Affymetrix Rat Gene 1.0 ST Array	10827214	-	-
Affymetrix Rat Gene 1.0 ST Array	10827210	-	-
Affymetrix Rat Gene 1.0 ST Array	10827202	-	-
Affymetrix Rat Gene 1.0 ST Array	10827205	-	-
Affymetrix Rat Gene 1.0 ST Array	10827203	-	-
Affymetrix Rat Gene 1.0 ST Array	10827212	-	-
Affymetrix Rat Gene 1.0 ST Array	10827207	-	-
Affymetrix Rat Gene 1.0 ST Array	10827209	-	-
Affymetrix Rat Gene 1.0 ST Array	10827215	-	-
Affymetrix Rat Gene 1.0 ST Array	10827208	-	-
Affymetrix Rat Gene 1.0 ST Array	10827211	-	-
Affymetrix Rat Gene 1.0 ST Array	10827204	-	-
Affymetrix Rat Gene 1.0 ST Array	10827206	-	-
Affymetrix Rat Gene 1.1 ST Array	10827201	-	-
Rat Genome 230 2.0 Array	1395853_at	-	-
Rat Genome 230 2.0 Array	1390238_PM_at	-	-
Rat Genome 230 2.0 Array	1390238_at	-	-
Rat Genome 230 2.0 Array	1395853_PM_at	-	-
Affymetrix HT Rat Focus Array	1395853_PM_at	-	-
Affymetrix HT Rat Focus Array	1395853_at	-	-
Affymetrix HT Rat Focus Array	1390238_at	-	-
Affymetrix HT Rat Focus Array	1390238_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200033583.rn.1	TC0200004853.rn.1	RTA TC
Rat Expression Set 230	1390238_at	-	-
Rat Expression Set 230	1390238_PM_at	-	-
Rat Expression Set 230	1395853_PM_at	-	-
Rat Expression Set 230	1395853_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10827201	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22164743	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365394	-	-