Lef1
Genomic Map
Back To TopAssay Details
| Gene Symbol: Lef1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_130429.1 | NP_569113.1 | 8 - 9 | 1006 | 92 | |
| XM_006233302.2 | XP_006233364.1 | 8 - 9 | 2325 | 92 | ||
| XM_006233303.2 | XP_006233365.1 | 8 - 9 | 2324 | 92 | ||
| XM_006233305.2 | XP_006233367.1 | 7 - 8 | 2241 | 92 | ||
| XM_006233306.2 | XP_006233368.1 | 7 - 8 | 2240 | 92 | ||
| XM_006233309.2 | XP_006233371.1 | 8 - 9 | 1758 | 92 | ||
| XM_008761489.1 | XP_008759711.1 | 8 - 9 | 2327 | 92 | ||
| XM_008761490.1 | XP_008759712.1 | 7 - 8 | 2243 | 92 | ||
| XM_008761491.1 | XP_008759713.1 | 8 - 9 | 1021 | 92 | ||
| XM_008761492.1 | XP_008759714.1 | 8 - 9 | 1758 | 92 | ||
| GenBank mRNA | AF198533.1 | - | 8 - 9 | 1006 | 92 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0200002214.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
3' Most
Rattus norvegicus
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription by RNA polymerase II
branching involved in blood vessel morphogenesis
osteoblast differentiation
neural crest cell migration
somitogenesis
kidney development
epithelial to mesenchymal transition
vasculature development
sprouting angiogenesis
regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
cell adhesion
positive regulation of cell population proliferation
response to lithium ion
positive regulation of gene expression
positive regulation of epithelial to mesenchymal transition
response to organic cyclic compound
Wnt signaling pathway
regulation of striated muscle tissue development
dentate gyrus development
hippocampus development
hypothalamus development
forebrain radial glial cell differentiation
forebrain neuroblast division
forebrain neuron differentiation
formation of radial glial scaffolds
regulation of cell-cell adhesion
negative regulation of cell-cell adhesion
positive regulation of cell-cell adhesion
regulation of Wnt signaling pathway
neutrophil differentiation
positive regulation of cell growth
embryonic limb morphogenesis
positive regulation of cell migration
BMP signaling pathway
positive regulation of granulocyte differentiation
mammary gland development
animal organ regeneration
negative regulation of interleukin-13 production
negative regulation of interleukin-4 production
negative regulation of interleukin-5 production
T cell receptor V(D)J recombination
B cell proliferation
odontogenesis of dentin-containing tooth
negative regulation of apoptotic process
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
negative regulation of DNA binding
steroid hormone mediated signaling pathway
tongue development
skin development
positive regulation by host of viral transcription
histone H3 acetylation
histone H4 acetylation
T-helper 1 cell differentiation
negative regulation of striated muscle tissue development
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
alpha-beta T cell differentiation
eye pigmentation
paraxial mesoderm formation
cell development
sensory perception of taste
muscle cell development
roof of mouth development
anatomical structure regression
canonical Wnt signaling pathway
face morphogenesis
cell chemotaxis
apoptotic process involved in morphogenesis
chorio-allantoic fusion
trachea gland development
cellular response to cytokine stimulus
cellular response to interleukin-4
positive regulation of cell proliferation in bone marrow
negative regulation of apoptotic process in bone marrow cell
odontoblast differentiation
positive regulation of cell cycle process
negative regulation of canonical Wnt signaling pathway
apoptotic process involved in blood vessel morphogenesis
transcription cis-regulatory region binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA-binding transcription factor activity, RNA polymerase II-specific
cis-regulatory region sequence-specific DNA binding
DNA-binding transcription activator activity, RNA polymerase II-specific
DNA binding
chromatin binding
DNA-binding transcription factor activity
protein binding
beta-catenin binding
transcription factor binding
DNA binding, bending
estrogen receptor activity
estrogen receptor binding
histone binding
cysteine-type endopeptidase inhibitor activity involved in apoptotic process
sequence-specific DNA binding
gamma-catenin binding
armadillo repeat domain binding
C2H2 zinc finger domain binding
negative regulation of transcription by RNA polymerase II
branching involved in blood vessel morphogenesis
osteoblast differentiation
neural crest cell migration
somitogenesis
kidney development
epithelial to mesenchymal transition
vasculature development
sprouting angiogenesis
regulation of transcription by RNA polymerase II
transcription by RNA polymerase II
cell adhesion
positive regulation of cell population proliferation
response to lithium ion
positive regulation of gene expression
positive regulation of epithelial to mesenchymal transition
response to organic cyclic compound
Wnt signaling pathway
regulation of striated muscle tissue development
dentate gyrus development
hippocampus development
hypothalamus development
forebrain radial glial cell differentiation
forebrain neuroblast division
forebrain neuron differentiation
formation of radial glial scaffolds
regulation of cell-cell adhesion
negative regulation of cell-cell adhesion
positive regulation of cell-cell adhesion
regulation of Wnt signaling pathway
neutrophil differentiation
positive regulation of cell growth
embryonic limb morphogenesis
positive regulation of cell migration
BMP signaling pathway
positive regulation of granulocyte differentiation
mammary gland development
animal organ regeneration
negative regulation of interleukin-13 production
negative regulation of interleukin-4 production
negative regulation of interleukin-5 production
T cell receptor V(D)J recombination
B cell proliferation
odontogenesis of dentin-containing tooth
negative regulation of apoptotic process
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
negative regulation of DNA binding
steroid hormone mediated signaling pathway
tongue development
skin development
positive regulation by host of viral transcription
histone H3 acetylation
histone H4 acetylation
T-helper 1 cell differentiation
negative regulation of striated muscle tissue development
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
alpha-beta T cell differentiation
eye pigmentation
paraxial mesoderm formation
cell development
sensory perception of taste
muscle cell development
roof of mouth development
anatomical structure regression
canonical Wnt signaling pathway
face morphogenesis
cell chemotaxis
apoptotic process involved in morphogenesis
chorio-allantoic fusion
trachea gland development
cellular response to cytokine stimulus
cellular response to interleukin-4
positive regulation of cell proliferation in bone marrow
negative regulation of apoptotic process in bone marrow cell
odontoblast differentiation
positive regulation of cell cycle process
negative regulation of canonical Wnt signaling pathway
apoptotic process involved in blood vessel morphogenesis
transcription cis-regulatory region binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA-binding transcription factor activity, RNA polymerase II-specific
cis-regulatory region sequence-specific DNA binding
DNA-binding transcription activator activity, RNA polymerase II-specific
DNA binding
chromatin binding
DNA-binding transcription factor activity
protein binding
beta-catenin binding
transcription factor binding
DNA binding, bending
estrogen receptor activity
estrogen receptor binding
histone binding
cysteine-type endopeptidase inhibitor activity involved in apoptotic process
sequence-specific DNA binding
gamma-catenin binding
armadillo repeat domain binding
C2H2 zinc finger domain binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P052007 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P052010 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 189754 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 32792 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 96990 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 831158 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 253678 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 460150 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 320695 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 133571 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 522851 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 866463 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 944003 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 92229 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 256341 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 25098 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 239819 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 247440 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 178471 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 408348 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 906165 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 47250 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 554854 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 632287 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 303163 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 390334 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 415809 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 817772 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 570750 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 936211 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 280918 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 145589 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 117013 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 263832 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 659667 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 192968 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 378429 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 787937 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 799592 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 256404 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 16289 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 743208 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 568101 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 926051 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 936939 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 782292 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 64493 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 189021 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 964227 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 240272 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 411936 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 650420 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 436982 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 302130 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 156130 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 343492 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 824314 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 779840 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385954 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 680754 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 349171 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 739248 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 122275 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 153112 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 84667 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 24884 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 139463 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 32925 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 119002 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 82085 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 35446 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 137883 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 23034 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 117250 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 48668 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 70160 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P052007 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P052010 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P052007 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P052010 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P052010 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P052007 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P240702 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700816123 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700363229 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 68584 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 75547 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 75510 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 91595 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 43176 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 51488 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 1538 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700363229 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700816123 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10819055 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819053 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819062 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819063 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819054 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819061 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819057 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819056 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819064 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819058 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819059 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10819052 | - | - |
| Rat Genome 230 2.0 Array | 1370138_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1383785_at | - | - |
| Rat Genome 230 2.0 Array | 1383785_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1370138_at | - | - |
| Affymetrix HT Rat Focus Array | 1370138_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1383785_at | - | - |
| Affymetrix HT Rat Focus Array | 1383785_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1370138_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0200015244.rn.1 | TC0200002214.rn.1 | RTA TC |
| Rat Expression Set 230 | 1370138_at | - | - |
| Rat Expression Set 230 | 1370138_PM_at | - | - |
| Rat Expression Set 230 | 1383785_at | - | - |
| Rat Expression Set 230 | 1383785_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10819052 | - | - |
| Rat Genome U34 Set | rc_AI231086_at | - | - |
| Rat Genome U34 Set | rc_AA858877_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1369385 | - | - |
| RatRef-12 Expression BeadChip | ILMN_65739 | - | - |
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