Rn01525067_m1

• Gene Symbol: Tfe3
• Gene Name: transcription factor binding to IGHM enhancer 3
• Gene Aliases: RGD1559642, Tcfe3
• Chromosome Location: Chr.X: 15574579 - 15587807 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tfe3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001271227.1	NP_001258156.1	2 - 3	507		60
	XM_006256721.2	XP_006256783.1	2 - 3	1152		60
	XM_006256722.1	XP_006256784.1	2 - 3	502		60
	XM_006256727.2	XP_006256789.1	2 - 3	516		60
	XM_006256728.2	XP_006256790.1	2 - 3	185		60
	XM_006256729.2	XP_006256791.1	2 - 3	136		60

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00001501.rn.1

Additional Information:

This assay is in the 5'UTR region of the XM_006256727.2,XM_006256728.2,XM_006256729.2 transcripts.

• Set Membership: Amplicon length less than or equal to 70, Rattus norvegicus, Probe spans exons

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
humoral immune response
biological_process
regulation of osteoclast differentiation
positive regulation of cell adhesion
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
molecular_function
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription regulatory region DNA binding
protein heterodimerization activity
protein dimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0X00009585.rn.1	TC0X00001501.rn.1	RTA TC