Rn01525079_g1 Best Coverage

• Gene Symbol: Rbm3
• Gene Name: RNA binding motif (RNP1, RRM) protein 3
• Gene Aliases: -
• Chromosome Location: Chr.X: 15098882 - 15102344 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rbm3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053696.1	NP_446148.1	5 - 6	513		95
	XM_006256694.1	XP_006256756.1	5 - 6	535		95
GenBank mRNA	DN933310.1	-	4 - 5	378		95
	FQ210873.1	-	5 - 6	492		95
	FQ220834.1	-	5 - 6	488		95
	FQ231739.1	-	5 - 6	488		95
	FQ232482.1	-	5 - 6	491		95
	FQ235187.1	-		490		95

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00000125.rn.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

translation
regulation of translation
response to cold
production of miRNAs involved in gene silencing by miRNA
positive regulation of translation

Function(s)

nucleotide binding
RNA binding
protein binding
ribosomal large subunit binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P548203	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	213393	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	730390	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P548203	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P548203	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P548203	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P548203	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10932427	-	-
Affymetrix Rat Gene 1.0 ST Array	10932429	-	-
Affymetrix Rat Gene 1.0 ST Array	10932425	-	-
Affymetrix Rat Gene 1.0 ST Array	10932428	-	-
Affymetrix Rat Gene 1.0 ST Array	10932426	-	-
Affymetrix Rat Gene 1.0 ST Array	10932423	-	-
Affymetrix Rat Gene 1.0 ST Array	10932424	-	-
Affymetrix Rat Gene 1.1 ST Array	10932422	-	-
Rat Genome 230 2.0 Array	1371583_PM_at	-	-
Rat Genome 230 2.0 Array	1371583_at	-	-
Affymetrix HT Rat Focus Array	1371583_PM_at	-	-
Affymetrix HT Rat Focus Array	1371583_at	-	-
Affymetrix Rat Clariom S Assay	PSR0X00000888.rn.1	TC0X00000125.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00000882.rn.1	TC0X00000125.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00000887.rn.1	TC0X00000125.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00000889.rn.1	TC0X00000125.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00000879.rn.1	TC0X00000125.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00000886.rn.1	TC0X00000125.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00000877.rn.1	TC0X00000125.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00000885.rn.1	TC0X00000125.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0X00000890.rn.1	TC0X00000125.rn.1	RTA TC
Rat Expression Set 230	1371583_at	-	-
Rat Expression Set 230	1371583_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10932422	-	-
Rat Genome U34 Set	rc_AI013911_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22034259	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353336	-	-