Rn01525981_g1 Best Coverage

• Gene Symbol: Agpat1
• Gene Name: 1-acylglycerol-3-phosphate O-acyltransferase 1
• Gene Aliases: -
• Chromosome Location: Chr.20: 4369399 - 4378272 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Agpat1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_212458.1	NP_997623.1	6 - 7	935		114
	XM_006255972.1	XP_006256034.1	6 - 7	788		114
	XM_006255973.1	XP_006256035.1	5 - 6	689		114
	XM_006255974.1	XP_006256036.1	6 - 7	877		114
	XM_006255975.1	XP_006256037.1	6 - 7	1178		114
GenBank mRNA	BC085852.1	-	6 - 7	881	7189891	114

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC2000000150.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Agpat1

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Process(es)

positive regulation of cytokine production
phosphatidic acid biosynthetic process

Function(s)

1-acylglycerol-3-phosphate O-acyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P419004	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P419004	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P419004	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P419004	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P419004	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10831457	-	-
Affymetrix Rat Gene 1.0 ST Array	10831455	-	-
Affymetrix Rat Gene 1.0 ST Array	10831459	-	-
Affymetrix Rat Gene 1.0 ST Array	10831453	-	-
Affymetrix Rat Gene 1.0 ST Array	10831456	-	-
Affymetrix Rat Gene 1.0 ST Array	10831454	-	-
Affymetrix Rat Gene 1.0 ST Array	10831458	-	-
Affymetrix Rat Gene 1.1 ST Array	10828303	-	-
Affymetrix Rat Gene 1.1 ST Array	10831452	-	-
Rat Genome 230 2.0 Array	1392763_at	-	-
Rat Genome 230 2.0 Array	1392763_PM_at	-	-
Rat Genome 230 2.0 Array	1371748_at	-	-
Rat Genome 230 2.0 Array	1371748_PM_at	-	-
Affymetrix HT Rat Focus Array	1371748_PM_at	-	-
Affymetrix HT Rat Focus Array	1392763_at	-	-
Affymetrix HT Rat Focus Array	1392763_PM_at	-	-
Affymetrix HT Rat Focus Array	1371748_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000001412.rn.1	TC2000000150.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000001411.rn.1	TC2000000150.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000001413.rn.1	TC2000000150.rn.1	RTA TC
Rat Expression Set 230	1371748_at	-	-
Rat Expression Set 230	1371748_PM_at	-	-
Rat Expression Set 230	1392763_at	-	-
Rat Expression Set 230	1392763_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10831452	-	-
Rat Genome U34 Set	rc_AI232877_at	-	-
Rat Genome U34 Set	rc_AI072646_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21755262	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1362181	-	-
RatRef-12 Expression BeadChip	ILMN_60667	-	-